RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ANXA8P13928 327 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 LIMS1P48059 325 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 IL5RAQ01344 420 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 FUT5Q11128 374 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 TOP3AQ13472 1001 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 USP53Q70EK8 1073 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 TMEFF1Q8IYR6 380 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 SLC5A8Q8N695 610 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 FBLIM1Q8WUP2 373 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 OR7D2Q96RA2 312 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 GABARAPL3Q9BY60 117 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 ANKRA2Q9H9E1 313 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 KCND3Q9UK17 655 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 NDRG4Q9ULP0 352 aaKnown RBP17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 NAALAD2Q9Y3Q0 740 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 GMPPBQ9Y5P6 360 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 HSPE1-MOB4S4R3N1 261 aa17.37■□□□□ 0.37
TRAPPC9-210ENST00000521667 HCRTR1O43613 425 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 ASNA1O43681 348 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 CHRM4P08173 479 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 EEF1B2P24534 225 aaKnown RBP17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 ESRRGP62508 458 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 NPRL3Q12980 569 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 GANABQ14697 944 aaKnown RBP17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 LAIR2Q6ISS4 152 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 ZNF773Q6PK81 442 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 SLC36A4Q6YBV0 504 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 OR4N5Q8IXE1 308 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 C1orf216Q8TAB5 229 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 COL26A1Q96A83 441 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 APOL4Q9BPW4 351 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 SPATA5L1Q9BVQ7 753 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 IL21RQ9HBE5 538 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 EQTNQ9NQ60 294 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 STARD5Q9NSY2 213 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 DNAAF2Q9NVR5 837 aaKnown RBP17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 BLOC1S6Q9UL45 172 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 CEPT1Q9Y6K0 416 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 MUC3AQ02505 3323 aa17.36■□□□□ 0.37
TRAPPC9-210ENST00000521667 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 LILRA5A6NI73 299 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 A8MVJ9 347 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 AQP9O43315 295 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 ETS2P15036 469 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 GSTT1P30711 240 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 CAPZBP47756 277 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 MAN2A2P49641 1150 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 HNRNPKP61978 463 aaKnown RBP eCLIP17.35■□□□□ 0.374e-6■□□□□ 8.7
TRAPPC9-210ENST00000521667 DEFB110Q30KQ9 67 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 PRAMEF8Q5VWM4 474 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 PRAMEF7Q5VXH5 474 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 OR7G2Q8NG99 324 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 PHF10Q8WUB8 498 aaKnown RBP17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 GIMAP5Q96F15 307 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 SLC38A3Q99624 504 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 BTBD2Q9BX70 525 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 NPLQ9BXD5 320 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 ACTRT3Q9BYD9 372 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 PAPOLBQ9NRJ5 636 aaKnown RBP17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 NTMQ9P121 344 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 KCNE3Q9Y6H6 103 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 A0A0G2JPF8 293 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 SLC9B1P1A6NJY1 282 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 HNRNPCL2B2RXH8 293 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 HNRNPCL3B7ZW38 293 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 H3BSA7 217 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 PROS1P07225 676 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 HNRNPCL4P0DMR1 293 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 CPMP14384 443 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 BCKDHBP21953 392 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 EPHA2P29317 976 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 GABARAPL2P60520 117 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 CDK5R2Q13319 367 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 COL9A2Q14055 689 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 GPAT3Q53EU6 434 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 OLIG3Q7RTU3 272 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 C17orf82Q86X59 251 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 CA13Q8N1Q1 262 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 OR5T3Q8NGG3 340 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 NCSTNQ92542 709 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 PITX2Q99697 317 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 PSD2Q9BQI7 771 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 RLIMQ9NVW2 624 aa17.35■□□□□ 0.37
TRAPPC9-210ENST00000521667 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 E9PQ18 207 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 CYR61O00622 381 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 FFAR1O14842 300 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 PCDH17O14917 1159 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 CCNB2O95067 398 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 PORP16435 677 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 AGXTP21549 392 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 CXCL12P48061 93 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 SHC2P98077 582 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 COLEC12Q5KU26 742 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 C6orf132Q5T0Z8 1188 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 BROXQ5VW32 411 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 TCTN3Q6NUS6 607 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 FAM111BQ6SJ93 734 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 KCTD8Q6ZWB6 473 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms