RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 ZG16O60844 167 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 ERLIN1O75477 346 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 RSL1D1O76021 490 aaKnown RBP13.09□□□□□ -0.31
VEGFA-221ENST00000520265 WISP2O76076 250 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 TUBBP07437 444 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 CHRNGP07510 517 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 LINC00032P0C843 101 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 CCL3P10147 92 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 DRD2P14416 443 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 PCSK2P16519 638 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 NTSP30990 170 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 GALNSP34059 522 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 RPL38P63173 70 aaKnown RBP13.09□□□□□ -0.31
VEGFA-221ENST00000520265 MRPS35P82673 323 aaKnown RBP13.09□□□□□ -0.31
VEGFA-221ENST00000520265 KRTCAP3Q53RY4 240 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 RNFT1Q5M7Z0 435 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 GOLM1Q8NBJ4 401 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 OR10G3Q8NGC4 313 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 OR52R1Q8NGF1 315 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 OR9A2Q8NGT5 310 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 KAT2AQ92830 837 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 GFM2Q969S9 779 aaKnown RBP13.09□□□□□ -0.31
VEGFA-221ENST00000520265 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 SGCZQ96LD1 299 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 PAIP2Q9BPZ3 127 aaKnown RBP13.09□□□□□ -0.31
VEGFA-221ENST00000520265 FAM173AQ9BQD7 235 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 DEFB127Q9H1M4 99 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 LRTM1Q9HBL6 345 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 DEPPQ9NTK1 212 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 TINAGQ9UJW2 476 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 RAB21Q9UL25 225 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 COL12A1Q99715 3063 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 PINLYPA6NC86 204 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 CAPN14A8MX76 684 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 TMEM233B4DJY2 109 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 NPHS1O60500 1241 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 SKAP2O75563 359 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-221ENST00000520265 HSPA4LO95757 839 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 LDLRP01130 860 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 ATP1B1P05026 303 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 STSP08842 583 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 PIGAP37287 484 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 TMED10P49755 219 aaKnown RBP13.08□□□□□ -0.32
VEGFA-221ENST00000520265 DUSP2Q05923 314 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 ARL13AQ5H913 290 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-221ENST00000520265 SLC22A10Q63ZE4 541 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 SLC22A16Q86VW1 577 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 TICAM1Q8IUC6 712 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 NUDCD3Q8IVD9 361 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 SAMD14Q8IZD0 417 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-221ENST00000520265 FAM9CQ8IZT9 166 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 SLC15A4Q8N697 577 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 OR7G1Q8NGA0 311 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 C16orf52Q8NHV5 167 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 TWIST2Q8WVJ9 160 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 CNRIP1Q96F85 164 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-221ENST00000520265 ZIM3Q96PE6 472 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 LDAHQ9H6V9 325 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 SLC35C2Q9NQQ7 365 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 MAT2BQ9NZL9 334 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 PLEKHB1Q9UF11 243 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-221ENST00000520265 CES1P1Q9UKY3 287 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 CFL2Q9Y281 166 aa13.08□□□□□ -0.32
VEGFA-221ENST00000520265 FLNCQ14315 2725 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 A0A1B0GTH9 108 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 ATP6AP2A0A1C7CYW4 349 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 PRRG2O14669 202 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 TP53I11O14683 189 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 AKAP10O43572 662 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 ATP6AP2O75787 350 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 NADKO95544 446 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-221ENST00000520265 CLPSP04118 112 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 TPOP07202 933 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 CNR1P21554 472 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 GSTM5P46439 218 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 MASP1P48740 699 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 NCBP2P52298 156 aaKnown RBP eCLIP13.07□□□□□ -0.32
VEGFA-221ENST00000520265 FBXW4P57775 412 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 PLCXD2Q0VAA5 305 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 ZNF155Q12901 538 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-221ENST00000520265 C3AR1Q16581 482 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.07□□□□□ -0.323e-13■□□□□ 10.2
VEGFA-221ENST00000520265 PRICKLE4Q2TBC4 344 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 KANK2Q63ZY3 851 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 HIST2H2BCQ6DN03 193 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 NOXRED1Q6NXP6 359 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 C3P1Q6ZMU1 363 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 SZRD1Q7Z422 152 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 TRIM46Q7Z4K8 759 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 SPPL2CQ8IUH8 684 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 SIAH3Q8IW03 269 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 ANKRD42Q8N9B4 389 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 CLHC1Q8NHS4 586 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 DIO2Q92813 273 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 DOHHQ9BU89 302 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 TMEM109Q9BVC6 243 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 ITPAQ9BY32 194 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 TTTY12Q9BZ98 90 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 ANKRA2Q9H9E1 313 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 C1orf109Q9NX04 203 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms