RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LATO43561 262 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 ZNF217O75362 1048 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 LGI1O95970 557 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 C21orf33P30042 268 aaPredicted RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 SNRPGP62308 76 aaKnown RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 YPEL5P62699 121 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 ABATP80404 500 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 PDE7AQ13946 482 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 ZFP69Q49AA0 526 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 PLAG1Q6DJT9 500 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 ARMCX6Q7L4S7 300 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 LGI4Q8N135 537 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 ASCC1Q8N9N2 400 aaKnown RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 FAM181AQ8N9Y4 354 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 OR9Q1Q8NGQ5 310 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 OR2M4Q96R27 311 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 MGLLQ99685 303 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 OSGEPL1Q9H4B0 414 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 WSB2Q9NYS7 404 aaPredicted RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 PLAGL1Q9UM63 463 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 CYP8B1Q9UNU6 501 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 SIT1Q9Y3P8 196 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 GPSM3Q9Y4H4 160 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 COLEC10Q9Y6Z7 277 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 LOC100506127A0A0U1RQW1 187 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 A0A1W2PPV9 198 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 KIAA0513O60268 411 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 CPSF4O95639 269 aaKnown RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 TGFB1P01137 390 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 SCG5P05408 212 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 STSP08842 583 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 LAMP1P11279 417 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 SPNP16150 400 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 HNRNPA2B1P22626 353 aaKnown RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 GTF2E2P29084 291 aaKnown RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 PKLRP30613 574 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 CCR5P51681 352 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 ZXDAP98168 799 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 RUNX1T1Q06455 604 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 PRDX1Q06830 199 aaKnown RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 KRT33BQ14525 404 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 NFATC4Q14934 902 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 NCF4Q15080 339 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 CDK10Q15131 360 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 CRB2Q5IJ48 1285 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 TMEM201Q5SNT2 666 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 GCNT6Q5T4J0 391 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 ADNP2Q6IQ32 1131 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 TRIM40Q6P9F5 258 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 XKRXQ6PP77 449 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 ZNF517Q6ZMY9 492 aaPredicted RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 SLC7A5P1Q8MH63 180 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 SLC5A8Q8N695 610 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 GPR156Q8NFN8 814 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 OR52N2Q8NGI0 321 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 TOE1Q96GM8 510 aaKnown RBP17.32■□□□□ 0.36
SDC2-202ENST00000518385 CHCHD6Q9BRQ6 235 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 OR51E2Q9H255 320 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 FZD3Q9NPG1 666 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 NDOR1Q9UHB4 597 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 HS3ST3A1Q9Y663 406 aa17.32■□□□□ 0.36
SDC2-202ENST00000518385 PRSS38A1L453 326 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 SEC14L5O43304 696 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 TBX19O60806 448 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 DIRAS1O95057 198 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 CCNB2O95067 398 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 PTHP01270 115 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 VIPP01282 170 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 CSTF2P33240 577 aaKnown RBP eCLIP17.31■□□□□ 0.363e-6■■■□□ 17.6
SDC2-202ENST00000518385 LIMS1P48059 325 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 RORCP51449 518 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 SPIBQ01892 262 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 FAM71E1Q6IPT2 247 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 VN1R5Q7Z5H4 357 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 SLC9B2Q86UD5 537 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 ATCAYQ86WG3 371 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 FAM46DQ8NEK8 389 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 OR10Q1Q8NGQ4 319 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 SPPL2AQ8TCT8 520 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 C16orf78Q8WTQ4 265 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 WDR92Q96MX6 357 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 PIP5K1AQ99755 562 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 SPNS1Q9H2V7 528 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 OR51B5Q9H339 312 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 KIR3DX1Q9H7L2 352 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 DIABLOQ9NR28 239 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 AASSQ9UDR5 926 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 ADAM29Q9UKF5 820 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 KCNK6Q9Y257 313 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 N6AMT1Q9Y5N5 214 aa17.31■□□□□ 0.36
SDC2-202ENST00000518385 ANKRD34BA5PLL1 514 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 ZAR1LA6NP61 321 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 RHCEP18577 417 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 CBLP22681 906 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 TCEA1P23193 301 aaKnown RBP17.3■□□□□ 0.36
SDC2-202ENST00000518385 ARFIP1P53367 373 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 SCN1BQ07699 218 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 ASAH1Q13510 395 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 ATAD3CQ5T2N8 411 aa17.3■□□□□ 0.36
SDC2-202ENST00000518385 KHDRBS2Q5VWX1 349 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms