RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TRIM15Q9C019 465 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 THAP2Q9H0W7 228 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 SIRPDQ9H106 197 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 RMND5AQ9H871 391 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 VAT1LQ9HCJ6 419 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 FANCFQ9NPI8 374 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 ACOXLQ9NUZ1 547 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 PANK4Q9NVE7 773 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 CLIP2Q9UDT6 1046 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 FAM153AQ9UHL3 310 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 TEKT2Q9UIF3 430 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 STUB1Q9UNE7 303 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 SNX6Q9UNH7 406 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 MGAT4BQ9UQ53 548 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 ERVK-19Q9WJR5 959 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 MAB21L2Q9Y586 359 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 ATP10DQ9P241 1426 aa2.75□□□□□ -1.97
HERC4-215ENST00000515753 INSRP06213 1382 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 PALLDQ8WX93 1383 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TONSLQ96HA7 1378 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 NRAPQ86VF7 1730 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 PLCH1Q4KWH8 1693 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 ALS2Q96Q42 1657 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CD163L1Q9NR16 1453 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 C15orf61A6NNL5 157 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 C2CD4DB7Z1M9 353 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CXCL11O14625 94 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CHEK1O14757 476 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 MAPK13O15264 365 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TBX19O60806 448 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TRIM49P0CI25 452 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TRIM49CP0CI26 452 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 DLATP10515 647 aaKnown RBP2.74□□□□□ -1.97
HERC4-215ENST00000515753 TNNI3P19429 210 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CDH3P22223 829 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 JAK1P23458 1154 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 FCARP24071 287 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 STIP1P31948 543 aaKnown RBP2.74□□□□□ -1.97
HERC4-215ENST00000515753 SFTPDP35247 375 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TNFSF10P50591 281 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 FKBP1BP68106 108 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 SPIBQ01892 262 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 ZNF415Q09FC8 603 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TAF10Q12962 218 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 HNRNPDQ14103 355 aaKnown RBP2.74□□□□□ -1.97
HERC4-215ENST00000515753 KRT31Q15323 416 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CARTPTQ16568 116 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 STX1AQ16623 288 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TPD52L1Q16890 204 aaPredicted RBP2.74□□□□□ -1.97
HERC4-215ENST00000515753 PHLDA2Q53GA4 152 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 BOLA3Q53S33 107 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 SLC35D3Q5M8T2 416 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CCDC183Q5T5S1 534 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 SLC25A47Q6Q0C1 308 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 FAM159AQ6UWV7 190 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CDHR3Q6ZTQ4 885 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 G2E3Q7L622 706 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 PRUNE1Q86TP1 453 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CROCCP3Q8IVE0 287 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 MISPQ8IVT2 679 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CCDC60Q8IWA6 550 aaPredicted RBP2.74□□□□□ -1.97
HERC4-215ENST00000515753 CENPLQ8N0S6 344 aaPredicted RBP2.74□□□□□ -1.97
HERC4-215ENST00000515753 BCORP1Q8N888 145 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 FAM133AQ8N9E0 248 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 BANPQ8N9N5 519 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 OR52B4Q8NGK2 314 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 OR10T2Q8NGX3 314 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 OR1L3Q8NH93 324 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 RFT1Q96AA3 541 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TUBGCP3Q96CW5 907 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 MAGED4Q96JG8 741 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 C10orf90Q96M02 699 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TAAR6Q96RI8 345 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CLEC7AQ9BXN2 247 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 RAB33BQ9H082 229 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 SHARPINQ9H0F6 387 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 LRRC40Q9H9A6 602 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 COG4Q9H9E3 785 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 VPS37BQ9H9H4 285 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 ROPN1Q9HAT0 212 aaPredicted RBP2.74□□□□□ -1.97
HERC4-215ENST00000515753 RAB9BQ9NP90 201 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 CHST11Q9NPF2 352 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 PHPT1Q9NRX4 125 aaPredicted RBP2.74□□□□□ -1.97
HERC4-215ENST00000515753 OR6C2Q9NZP2 312 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 EPHA6Q9UF33 1036 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 NARFQ9UHQ1 456 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 SLC12A6Q9UHW9 1150 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 ENTPD4Q9Y227 616 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 MFHAS1Q9Y4C4 1052 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 NRKQ7Z2Y5 1582 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TDRD15B5MCY1 1934 aaKnown RBP2.74□□□□□ -1.97
HERC4-215ENST00000515753 FLT4P35916 1363 aa2.74□□□□□ -1.97
HERC4-215ENST00000515753 TRPM3Q9HCF6 1732 aaPredicted RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 MARF1Q9Y4F3 1742 aaKnown RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 H3BMM5 538 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 EEF2KO00418 725 aaKnown RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 TLX2O43763 284 aaPredicted RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 NUDT21O43809 227 aaKnown RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 ACSL4O60488 711 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 CYTIPO60759 359 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms