RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 NMRK1Q9NWW6 199 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 COQ3Q9NZJ6 369 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 VPS29Q9UBQ0 182 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 BOKQ9UMX3 212 aaPredicted RBP9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 DTX4Q9Y2E6 619 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 STK38LQ9Y2H1 464 aa9.62□□□□□ -0.87
HMGXB3-205ENST00000514469 ATP6AP2A0A1C7CYW4 349 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 ANKRD33BA6NCL7 494 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 GOLGA8RI6L899 631 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 HCN1O60741 890 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 TRIM3O75382 744 aaPredicted RBP9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 ATP6AP2O75787 350 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 LRATO95237 230 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 KRT6AP02538 564 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 KRT6BP04259 564 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 SNRPB2P08579 225 aaKnown RBP9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 RFPL3SP0C7P2 107 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 PYGBP11216 843 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 ENDOUP21128 410 aaKnown RBP9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 NT5EP21589 574 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 GPX3P22352 226 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 CHRNB4P30926 498 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 SOX18P35713 384 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 KRT6CP48668 564 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 MAN2A2P49641 1150 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 TMED10P49755 219 aaKnown RBP9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 HTR6P50406 440 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 DUSP2Q05923 314 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 MGAT2Q10469 447 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 LCP2Q13094 533 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 DUSP8Q13202 625 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 SLC10A1Q14973 349 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 PRICKLE4Q2TBC4 344 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 GXYLT1Q4G148 440 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 TBCELQ5QJ74 424 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 GPRIN3Q6ZVF9 776 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 GBP7Q8N8V2 638 aaPredicted RBP9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 EIF1ADQ8N9N8 165 aaKnown RBP9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 CHTF18Q8WVB6 975 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 KLHL29Q96CT2 875 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 ZNF681Q96N22 645 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 SECISBP2Q96T21 854 aaKnown RBP9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 SPOCK3Q9BQ16 436 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 FAIM2Q9BWQ8 316 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 ACPTQ9BZG2 426 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 ENKD1Q9H0I2 346 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 GSTO2Q9H4Y5 243 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 QPCTLQ9NXS2 382 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 MAT2BQ9NZL9 334 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 SPRR3Q9UBC9 169 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 ZNF639Q9UID6 485 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 MCM8Q9UJA3 840 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 EMCNQ9ULC0 261 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 RNF6Q9Y252 685 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 FAM215AQ9Y5M1 114 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 NPFFR2Q9Y5X5 522 aa9.61□□□□□ -0.87
HMGXB3-205ENST00000514469 DIDO1Q9BTC0 2240 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 TRGV5A0A0B4J1U4 118 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 SERTM1A2A2V5 107 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ENO4A6NNW6 628 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 CAPN14A8MX76 684 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 TP53I11O14683 189 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 GLRA3O75311 464 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ULK1O75385 1050 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ERAL1O75616 437 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ESRRBO95718 433 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 CBX7O95931 251 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ENO1P06733 434 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 CHN1P15882 459 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 IGFBP2P18065 325 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 CSNK2A2P19784 350 aaPredicted RBP9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ACVR2AP27037 513 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 HMOX2P30519 316 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 FEN1P39748 380 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 PKNOX1P55347 436 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 NRG3P56975 720 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 NUP107P57740 925 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 FBXW4P57775 412 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 RAE1P78406 368 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 TFF3Q07654 80 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 MAP4K2Q12851 820 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 SPIN4Q56A73 249 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 HLA-DQA1Q5Y7H0 255 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 RTL6Q6ICC9 239 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 TMEM64Q6YI46 380 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 SH2D5Q6ZV89 423 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ACAD11Q709F0 780 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 SRRM1Q8IYB3 904 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 OR5M9Q8NGP3 310 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 OR5M3Q8NGP4 307 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 METTL6Q8TCB7 284 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 SPPL2AQ8TCT8 520 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 RND1Q92730 232 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 DIO2Q92813 273 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 SARAFQ96BY9 339 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 CTHRC1Q96CG8 243 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 NTNG2Q96CW9 530 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 C11orf24Q96F05 449 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms