RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CASC3O15234 703 aaKnown RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 PLOD3O60568 738 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 PRAMEF10O60809 474 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 UGT2B11O75310 529 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 JRKO75564 520 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 NSA2O95478 260 aaKnown RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 ZBTB11O95625 1053 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 RECKO95980 971 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 HMGN2P05204 90 aaKnown RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 BCHEP06276 602 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 OR12D1P0DN82 309 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 GNSP15586 552 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 GLB1P16278 677 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 CDH2P19022 906 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 AQP1P29972 269 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 GALNSP34059 522 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 RYKP34925 604 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 RPL5P46777 297 aaKnown RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 IST1P53990 364 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 CASP9P55211 416 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 SNRPNP63162 240 aaKnown RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 GPLD1P80108 840 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 IGLV3-21P80748 117 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 KEAP1Q14145 624 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 SHBQ15464 509 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 GPR19Q15760 415 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 DEFB133Q30KQ1 61 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 FHL5Q5TD97 284 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 LYSMD4Q5XG99 296 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 PMS2CLQ68D20 193 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 CDC73Q6P1J9 531 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 CEP68Q76N32 757 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 KANSL1Q7Z3B3 1105 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 GALNT10Q86SR1 603 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 CYP4Z1Q86W10 505 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 ZNF761Q86XN6 746 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 KRT73Q86Y46 540 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 KMT5CQ86Y97 462 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 SLC25A45Q8N413 288 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 PIK3C3Q8NEB9 887 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 ZNF555Q8NEP9 628 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 OR6C4Q8NGE1 309 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 OR10Q1Q8NGQ4 319 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 OR9A2Q8NGT5 310 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 SPPL2AQ8TCT8 520 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 FBLIM1Q8WUP2 373 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 GAB3Q8WWW8 586 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 NR4A3Q92570 626 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 RAB8BQ92930 207 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 RMND5BQ96G75 393 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 DHRS1Q96LJ7 313 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 ZNF354BQ96LW1 612 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 MS4A4EQ96PG1 132 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 TRNT1Q96Q11 434 aaKnown RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 OR7D2Q96RA2 312 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 MBOAT4Q96T53 435 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 CSF3RQ99062 836 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 ELF4Q99607 663 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 MAP3K3Q99759 626 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 TREX2Q9BQ50 279 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 TMEM121BQ9BXQ6 578 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 KLHL25Q9H0H3 589 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 TOR3AQ9H497 397 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 SMURF2Q9HAU4 748 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 PDE7BQ9NP56 450 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 EXD2Q9NVH0 621 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 UCKL1Q9NWZ5 548 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 METRNQ9UJH8 293 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 ACAD8Q9UKU7 415 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 RAB23Q9ULC3 237 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 C19orf53Q9UNZ5 99 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 SAMHD1Q9Y3Z3 626 aaKnown RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 PCDHGB5Q9Y5G0 923 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 ORC6Q9Y5N6 252 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 MAGED1Q9Y5V3 778 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 LYVE1Q9Y5Y7 322 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 RNF215Q9Y6U7 377 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 COL5A1P20908 1838 aaPredicted RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 IGHV1OR21-1A0A087WYE8 117 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 LOC100130705A0A1B0GUX0 176 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 A0A1B0GVT2 93 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 SMIM31A0A1B0GVY4 71 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 H3BMH7 237 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 TNFRSF11BO00300 401 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 TOX3O15405 576 aaPredicted RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 YKT6O15498 198 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 HCRTR1O43613 425 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 FOXS1O43638 330 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 SLC28A2O43868 658 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 HS6ST1O60243 411 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 DNAJB6O75190 326 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 OPN1SWP03999 348 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 IFNW1P05000 195 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 EIF2S1P05198 315 aaKnown RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 TFAP2AP05549 437 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 FESP07332 822 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 GNAO1P09471 354 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PABPC4LP0CB38 370 aaKnown RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 SLC35E2P0CK97 266 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 C8orf89P0DMQ9 161 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms