RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 NAT8LQ8N9F0 302 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 ZNF473Q8WTR7 871 aaKnown RBP9.92□□□□□ -0.82
DDX41-216ENST00000513562 RIT1Q92963 219 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 CAVIN3Q969G5 261 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 BAG1Q99933 345 aaPredicted RBP9.92□□□□□ -0.82
DDX41-216ENST00000513562 TMEM79Q9BSE2 394 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 EFCAB11Q9BUY7 163 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 REG4Q9BYZ8 158 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 TSPY26PQ9H489 355 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 ELOVL5Q9NYP7 299 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 ARID1AO14497 2285 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 C16orf97H3BN30 126 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 CLGNO14967 610 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 OR10H2O60403 315 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 TTC4O95801 387 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 RHOXF2BP0C7M4 288 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 FAM157CP0CG43 387 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 GALNSP34059 522 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 CLDN18P56856 261 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 NRG3P56975 720 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 SLAMF1Q13291 335 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 SETDB1Q15047 1291 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 TSNQ15631 228 aaKnown RBP9.91□□□□□ -0.82
DDX41-216ENST00000513562 KRTAP24-1Q3LI83 254 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 KBTBD12Q3ZCT8 623 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 PAGE2BQ5JRK9 111 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 SPANXN3Q5MJ09 141 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 TEDDM1Q5T9Z0 273 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 C18orf63Q68DL7 685 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 TTC27Q6P3X3 843 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 ZNF704Q6ZNC4 412 aaPredicted RBP9.91□□□□□ -0.82
DDX41-216ENST00000513562 C22orf34Q6ZV56 151 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 SH2D5Q6ZV89 423 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 FRA10AC1Q70Z53 315 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 BTLAQ7Z6A9 289 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 TRIM42Q8IWZ5 723 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 NKAPQ8N5F7 415 aaKnown RBP9.91□□□□□ -0.82
DDX41-216ENST00000513562 ZNF611Q8N823 705 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 C17orf47Q8NEP4 570 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 OR14L1PQ8NHC6 308 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 ADIPOR1Q96A54 375 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 PGM2Q96G03 612 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 CERS2Q96G23 380 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 ZC3HAV1LQ96H79 300 aaKnown RBP9.91□□□□□ -0.82
DDX41-216ENST00000513562 KRT12Q99456 494 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 SLC39A3Q9BRY0 314 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 SORBS1Q9BX66 1292 aaKnown RBP9.91□□□□□ -0.82
DDX41-216ENST00000513562 PHACTR1Q9C0D0 580 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 OPN3Q9H1Y3 402 aaPredicted RBP9.91□□□□□ -0.82
DDX41-216ENST00000513562 METTL7AQ9H8H3 244 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 ACTR8Q9H981 624 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 SERHLQ9NQF3 203 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 YAE1D1Q9NRH1 226 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 DNAJC11Q9NVH1 559 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 PSD3Q9NYI0 1048 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 PHF11Q9UIL8 331 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 RNF112Q9ULX5 631 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 MAPRE3Q9UPY8 281 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 DLGAP4Q9Y2H0 992 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 EML6Q6ZMW3 1958 aa9.91□□□□□ -0.82
DDX41-216ENST00000513562 RAI1Q7Z5J4 1906 aaPredicted RBP9.91□□□□□ -0.82
DDX41-216ENST00000513562 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.9□□□□□ -0.82
DDX41-216ENST00000513562 HAX1O00165 279 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 TAPBPO15533 448 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 GPR75O95800 540 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 ZNF708P17019 499 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 EPORP19235 508 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 ABCD3P28288 659 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 TLX1P31314 330 aaPredicted RBP9.9□□□□□ -0.82
DDX41-216ENST00000513562 SSTR4P31391 388 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 GGT5P36269 586 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 GMPRP36959 345 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 PTGDSP41222 190 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 CASP2P42575 452 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 KIR2DL2P43627 348 aaPredicted RBP9.9□□□□□ -0.82
DDX41-216ENST00000513562 STARP49675 285 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 HNRNPH2P55795 449 aaKnown RBP9.9□□□□□ -0.82
DDX41-216ENST00000513562 RPS13P62277 151 aaKnown RBP9.9□□□□□ -0.82
DDX41-216ENST00000513562 LAPTM5Q13571 262 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 E2F2Q14209 437 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 ZNF460Q14592 562 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 TGFBIQ15582 683 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 TBCCQ15814 346 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 BEX5Q5H9J7 111 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 KHDRBS2Q5VWX1 349 aaKnown RBP9.9□□□□□ -0.82
DDX41-216ENST00000513562 HLA-DQA1Q5Y7H0 255 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 OR2A2Q6IF42 318 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 SLC30A6Q6NXT4 461 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 AAGABQ6PD74 315 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 MILR1Q7Z6M3 343 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 GPR180Q86V85 440 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 IFNEQ86WN2 208 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 PRR22Q8IZ63 422 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 TCAIMQ8N3R3 496 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 CNEP1R1Q8N9A8 125 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 OSBPL11Q9BXB4 747 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 PLAC1Q9HBJ0 212 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 GALNT9Q9HCQ5 603 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 CTNNAL1Q9UBT7 734 aa9.9□□□□□ -0.82
DDX41-216ENST00000513562 PTBP2Q9UKA9 531 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms