RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SLC17A6Q9P2U8 582 aa9.5□□□□□ -0.89
CLDND1-227ENST00000513452 DTX4Q9Y2E6 619 aa9.5□□□□□ -0.89
CLDND1-227ENST00000513452 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.5□□□□□ -0.898e-16■■■■■ 31.6
CLDND1-227ENST00000513452 MED12LQ86YW9 2145 aa9.5□□□□□ -0.89
CLDND1-227ENST00000513452 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 CLGNO14967 610 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 HCRTR2O43614 444 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 CRHP06850 196 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 THBDP07204 575 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 MLNP12872 115 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 HIST1H1TP22492 207 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 SSTR4P31391 388 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 IDUAP35475 653 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 SSR2P43308 183 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 MAGEA6P43360 314 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 LHX2P50458 406 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 GFRA1P56159 465 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 NRG3P56975 720 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 RPS13P62277 151 aaKnown RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 KIF5AQ12840 1032 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 LCE2DQ5TA82 110 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 HLA-DQA1Q5Y7H0 255 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 OR2A2Q6IF42 318 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 SH2D5Q6ZV89 423 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 ST13P4Q8IZP2 240 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 RIT1Q92963 219 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 GTPBP3Q969Y2 492 aaKnown RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 TRMT61AQ96FX7 289 aaKnown RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 ZNF845Q96IR2 970 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 VPS39Q96JC1 886 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 SORBS1Q9BX66 1292 aaKnown RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 OSBPL11Q9BXB4 747 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 BEX2Q9BXY8 128 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 OR2B2Q9GZK3 357 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 PITHD1Q9GZP4 211 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 SLCO5A1Q9H2Y9 848 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 ACTR8Q9H981 624 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 GALNT9Q9HCQ5 603 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 HEY2Q9UBP5 337 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 ZNF490Q9ULM2 529 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-227ENST00000513452 DLGAP4Q9Y2H0 992 aa9.49□□□□□ -0.89
CLDND1-227ENST00000513452 SLC22A20A6NK97 555 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 SAP18O00422 153 aaKnown RBP9.48□□□□□ -0.89
CLDND1-227ENST00000513452 KLF4O43474 513 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 GPRIN2O60269 458 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 PRAMEF4O60810 478 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 ADAM11O75078 769 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 SCELO95171 688 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 AHSGP02765 367 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 ZNF708P17019 499 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 KRT15P19012 456 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 TCEA1P23193 301 aaKnown RBP9.48□□□□□ -0.89
CLDND1-227ENST00000513452 CDKN1AP38936 164 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 KIR2DL2P43627 348 aaPredicted RBP9.48□□□□□ -0.89
CLDND1-227ENST00000513452 SLC6A12P48065 614 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 HNMTP50135 292 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 CLDN18P56856 261 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 CDKL1Q00532 357 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 TNFRSF17Q02223 184 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 FUT7Q11130 342 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 CRYMQ14894 314 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 EXOC3L2Q2M3D2 409 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 AP5B1Q2VPB7 878 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 PRAMEF9Q5VWM5 478 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 C18orf63Q68DL7 685 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 DESI1Q6ICB0 168 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 FRA10AC1Q70Z53 315 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 SRFBP1Q8NEF9 429 aaKnown RBP9.48□□□□□ -0.89
CLDND1-227ENST00000513452 AKAP1Q92667 903 aaKnown RBP eCLIP9.48□□□□□ -0.89
CLDND1-227ENST00000513452 TP53INP1Q96A56 240 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 PLPPR2Q96GM1 343 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 SFXN2Q96NB2 322 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 PELOQ9BRX2 385 aaKnown RBP9.48□□□□□ -0.89
CLDND1-227ENST00000513452 MS4A8Q9BY19 250 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 PHACTR1Q9C0D0 580 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 EHD1Q9H4M9 534 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 TAS2R10Q9NYW0 307 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 WWOXQ9NZC7 414 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 KLRF1Q9NZS2 232 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 RNF112Q9ULX5 631 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 OARD1Q9Y530 152 aa9.48□□□□□ -0.89
CLDND1-227ENST00000513452 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.47□□□□□ -0.89
CLDND1-227ENST00000513452 FRG2CA6NGY1 282 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 NCF1BA6NI72 391 aaPredicted RBP9.47□□□□□ -0.89
CLDND1-227ENST00000513452 NCF1CA8MVU1 366 aaPredicted RBP9.47□□□□□ -0.89
CLDND1-227ENST00000513452 OVOL3O00110 214 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 ICOSLGO75144 302 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 CDH16O75309 829 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 CGAP01215 116 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 IGHV4-39P01824 125 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 ABCB1P08183 1280 aaPredicted RBP9.47□□□□□ -0.89
CLDND1-227ENST00000513452 SOD3P08294 240 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 NCF1P14598 390 aaPredicted RBP9.47□□□□□ -0.89
CLDND1-227ENST00000513452 ZNF37AP17032 561 aaPredicted RBP9.47□□□□□ -0.89
CLDND1-227ENST00000513452 CD22P20273 847 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 TBXA2RP21731 343 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 CNTFP26441 200 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 ABCD3P28288 659 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 MAGEA3P43357 314 aa9.47□□□□□ -0.89
CLDND1-227ENST00000513452 SLAMF1Q13291 335 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms