RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 MBD3L3A6NE82 208 aaPredicted RBP14.52□□□□□ -0.09
RAB40C-202ENST00000509637 MBD3L5A6NJ08 208 aaPredicted RBP14.52□□□□□ -0.09
RAB40C-202ENST00000509637 OR6C76A6NM76 312 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 H0YIV9 168 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 OR7A17O14581 309 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 ZSCAN12O43309 604 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 OR10H2O60403 315 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 NME6O75414 186 aaPredicted RBP14.52□□□□□ -0.09
RAB40C-202ENST00000509637 C2P06681 752 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 ABCB1P08183 1280 aaPredicted RBP14.52□□□□□ -0.09
RAB40C-202ENST00000509637 CTAGE8P0CG41 777 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 NR2F6P10588 404 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 EPXP11678 715 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 EPB42P16452 691 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 HOXC12P31275 282 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 GALNSP34059 522 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 GNG11P61952 73 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 RPS6KA2Q15349 733 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 PFKFB4Q16877 469 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 NHSL2Q5HYW2 709 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 TMEM198Q66K66 360 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 GOLGA7Q7Z5G4 137 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 LACC1Q8IV20 430 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 CTAGE4Q8IX94 777 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 LIX1Q8N485 282 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 L3MBTL4Q8NA19 623 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 CHDHQ8NE62 594 aaPredicted RBP14.52□□□□□ -0.09
RAB40C-202ENST00000509637 MBD3L2Q8NHZ7 208 aaPredicted RBP14.52□□□□□ -0.09
RAB40C-202ENST00000509637 HGDQ93099 445 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 TP53INP1Q96A56 240 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 ZNF597Q96LX8 424 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 TRIB1Q96RU8 372 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 ZBTB26Q9HCK0 441 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 WHRNQ9P202 907 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 CES1P1Q9UKY3 287 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 CAMK2AQ9UQM7 478 aa14.52□□□□□ -0.09
RAB40C-202ENST00000509637 CD8B2A6NJW9 211 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 C17orf51A8MQB3 221 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 DVL2O14641 736 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 EIF3HO15372 352 aaKnown RBP eCLIP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 HRGP04196 525 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 S100BP04271 92 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 CD53P19397 219 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 GPX3P22352 226 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 PTX3P26022 381 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 SERPINB1P30740 379 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 SPRP35270 261 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 BIKQ13323 160 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 CUL3Q13618 768 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 POU4F3Q15319 338 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 PCBP2Q15366 365 aaKnown RBP eCLIP14.51□□□□□ -0.098e-6■■□□□ 13.7
RAB40C-202ENST00000509637 NNATQ16517 81 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 DEFB113Q30KQ7 82 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 LIPJQ5W064 366 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 TIGD3Q6B0B8 471 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 FAM180BQ6P0A1 224 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 RPS27LQ71UM5 84 aaKnown RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 MAATS1Q7Z4T9 603 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 ADGRE4PQ86SQ3 457 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 MYLK4Q86YV6 388 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 DND1Q8IYX4 353 aaKnown RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 FAM83FQ8NEG4 500 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 OR52B6Q8NGF0 335 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 GOT1L1Q8NHS2 421 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 CDKL2Q92772 493 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 NSUN5Q96P11 429 aaKnown RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 TUBA1CQ9BQE3 449 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 OR10A5Q9H207 317 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 LYARQ9NX58 379 aaKnown RBP14.51□□□□□ -0.09
RAB40C-202ENST00000509637 ADGRE2Q9UHX3 823 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 PYCARDQ9ULZ3 195 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 PCDHGA11Q9Y5H2 935 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 PCNX3Q9H6A9 2034 aa14.51□□□□□ -0.09
RAB40C-202ENST00000509637 TUBAL3A6NHL2 446 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 FAM47E-STBD1D6RA91 191 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 PPP6CO00743 305 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 SIAH2O43255 324 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 ABCD3P28288 659 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 TLX1P31314 330 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-202ENST00000509637 BUD31P41223 144 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-202ENST00000509637 STARP49675 285 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 DGKQP52824 942 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 ARFIP1P53367 373 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 PPP2R2AP63151 447 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 TBL3Q12788 808 aaKnown RBP14.5□□□□□ -0.09
RAB40C-202ENST00000509637 GTF2H2Q13888 395 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 SLMAPQ14BN4 828 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 EXOSC7Q15024 291 aaKnown RBP14.5□□□□□ -0.09
RAB40C-202ENST00000509637 GTF2H2CQ6P1K8 395 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 RAPH1Q70E73 1250 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 CXorf67Q86X51 503 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-202ENST00000509637 WDSUB1Q8N9V3 476 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 FBXO25Q8TCJ0 367 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 TMEM41AQ96HV5 264 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 NAPGQ99747 312 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-202ENST00000509637 IPPKQ9H8X2 491 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 ACTR8Q9H981 624 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 GALNT9Q9HCQ5 603 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 SNX15Q9NRS6 342 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 PSD3Q9NYI0 1048 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms