RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MRPS2Q9Y399 296 aaKnown RBP3.72□□□□□ -1.81
NEDD4-209ENST00000508871 STYXL1Q9Y6J8 313 aa3.72□□□□□ -1.81
NEDD4-209ENST00000508871 TRGV11A0A075B6L2 103 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 C17orf102A2RUQ5 167 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 MTMR11A4FU01 709 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 M0R296 226 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 TMPRSS11DO60235 418 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 NOS1APO75052 506 aaPredicted RBP3.71□□□□□ -1.81
NEDD4-209ENST00000508871 KLKB1P03952 638 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 NR3C1P04150 777 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 SLC2A1P11166 492 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 HOXD8P13378 290 aaPredicted RBP3.71□□□□□ -1.81
NEDD4-209ENST00000508871 HOXB1P14653 301 aaPredicted RBP3.71□□□□□ -1.81
NEDD4-209ENST00000508871 VCLP18206 1134 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 GABRB1P18505 474 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 STOMP27105 288 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 DNA2P51530 1060 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 HMGCS2P54868 508 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 ESRRGP62508 458 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 SPDYCQ5MJ68 293 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 GPRC6AQ5T6X5 926 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 CEACAM20Q6UY09 585 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 NDUFAF7Q7L592 441 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 STPG3Q8N7X2 389 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 LMNTD1Q8N9Z9 388 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 SMG8Q8ND04 991 aaKnown RBP3.71□□□□□ -1.81
NEDD4-209ENST00000508871 GPRC5AQ8NFJ5 357 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 CYP2W1Q8TAV3 490 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 CHPT1Q8WUD6 406 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 TM9SF4Q92544 642 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 HAS2Q92819 552 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 SNF8Q96H20 258 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 XYLT2Q9H1B5 865 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 KAT8Q9H7Z6 458 aaKnown RBP3.71□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC59Q9P031 241 aaKnown RBP3.71□□□□□ -1.81
NEDD4-209ENST00000508871 DNPEPQ9ULA0 475 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 Q9Y3F1 56 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 SNX10Q9Y5X0 201 aa3.71□□□□□ -1.81
NEDD4-209ENST00000508871 PMS2P1A4D2B8 440 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 OR2A25A4D2G3 310 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CCDC160A6NGH7 325 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 NPIPB13A6NJU9 1138 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 NPIPB4C9JG80 1138 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 STBD1O95210 358 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 HEXAP06865 529 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 LINGO3P0C6S8 592 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ETFAP13804 333 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 PTPN2P17706 415 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 NMBRP28336 390 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 NAMPTP43490 491 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 KIR3DL1P43629 444 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 RCAN2Q14206 197 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 KCTD19Q17RG1 926 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 DCAF6Q58WW2 860 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 GPR107Q5VW38 600 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TANGO2Q6ICL3 276 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 OR8G2PQ6IF36 304 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TCEAL6Q6IPX3 200 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SYCE2Q6PIF2 218 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ETV3LQ6ZN32 361 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TRIM67Q6ZTA4 783 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TSEN54Q7Z6J9 526 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 VANGL1Q8TAA9 524 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF582Q96NG8 517 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 HAPLN3Q96S86 360 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 FIZ1Q96SL8 496 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CHRDL1Q9BU40 450 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 KIFC1Q9BW19 673 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SLC12A9Q9BXP2 914 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 GANQ9H2C0 597 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SEC61A2Q9H9S3 476 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF302Q9NR11 478 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CLEC4EQ9ULY5 219 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TMED3Q9Y3Q3 217 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 A0A096LPK6 155 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TRIM49BA6NDI0 452 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 C4orf47A7E2U8 309 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM189-UBE2V1I3L0A0 370 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 J3QL48 77 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 BCAS1O75363 584 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 FAM155BO75949 473 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 HIST1H2AGP0C0S8 130 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 B4GALT1P15291 398 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CFL1P23528 166 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ITPKBP27987 946 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SLC5A2P31639 672 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 GRIA3P42263 894 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ACADVLP49748 655 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SERPINB8P50452 374 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CDH6P55285 790 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 STXBP1P61764 594 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 C2orf80Q0P641 193 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ABHD18Q0P651 414 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 RASGEF1BQ0VAM2 473 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 PDZK1IP1Q13113 114 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 UBE2V1Q13404 147 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ITGA9Q13797 1035 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 PIGHQ14442 188 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 AARDQ4LEZ3 155 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CYP4A22Q5TCH4 519 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms