RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 AGFG1P52594 562 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 MAPK10P53779 464 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 RHDQ02161 417 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ABHD18Q0P651 414 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 BST1Q10588 318 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 KCNAB1Q14722 419 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SMU1Q2TAY7 513 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 KHDRBS2Q5VWX1 349 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 FRMPD2BQ6IN97 320 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 PWWP2BQ6NUJ5 590 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 FAM111BQ6SJ93 734 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF517Q6ZMY9 492 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 MED25Q71SY5 747 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 PAGE2Q7Z2X7 111 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SYVN1Q86TM6 617 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CMTM4Q8IZR5 234 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR4N4Q8N0Y3 316 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF740Q8NDX6 193 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR2L5Q8NG80 312 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 HUS1BQ8NHY5 278 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 PPP1R35Q8TAP8 253 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 MGARPQ8TDB4 240 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ADAMTS18Q8TE60 1221 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CKAP2Q8WWK9 683 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 STON2Q8WXE9 905 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CCT6BQ92526 530 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF75CPQ92670 426 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 FKBP10Q96AY3 582 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 MS4A6EQ96DS6 147 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SMIM10Q96HG1 83 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 MRGPRX4Q96LA9 322 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 C7orf26Q96N11 449 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 DMRTA2Q96SC8 542 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SIKE1Q9BRV8 207 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 TBCDQ9BTW9 1192 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 MS4A8Q9BY19 250 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 GPR87Q9BY21 358 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SPRY4Q9C004 299 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 REXO4Q9GZR2 422 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SPNS1Q9H2V7 528 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 NELFAQ9H3P2 528 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CCDC134Q9H6E4 229 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ACTR5Q9H9F9 607 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ANKHQ9HCJ1 492 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ASCL3Q9NQ33 180 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CUTCQ9NTM9 273 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 TXLNGQ9NUQ3 528 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 VPS29Q9UBQ0 182 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF225Q9UK10 706 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 NXT1Q9UKK6 140 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 PADI1Q9ULC6 663 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 POLHQ9Y253 713 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 RUVBL1Q9Y265 456 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 TMED5Q9Y3A6 229 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 FER1L5A0AVI2 2057 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ANKRD11Q6UB99 2663 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CROCCQ5TZA2 2017 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CHD8Q9HCK8 2581 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 ACACBO00763 2458 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 A0A1W2PNU3 283 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 FAM149AA5PLN7 773 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 TMEM8BA6NDV4 472 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 TRPC5OSA6NMA1 111 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MAGEB17A8MXT2 336 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 C21orf140B9A014 251 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 PPP6CO00743 305 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 UBFD1O14562 309 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 HCRTR1O43613 425 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 PRAMEF10O60809 474 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 RSL1D1O76021 490 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MYO1DO94832 1006 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 KIAA0754O94854 1291 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 TGDSO95455 350 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 PDYNP01213 254 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SERPIND1P05546 499 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 RAB40ALP0C0E4 278 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 LIPCP11150 499 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 TSPAN8P19075 237 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 ITGAXP20702 1163 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SLC5A2P31639 672 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 RORAP35398 523 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 ETV5P41161 510 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SELENOPP49908 381 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 RAP1GDS1P52306 607 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MTTPP55157 894 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 PER3P56645 1201 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 TRA2BP62995 288 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 IRX1P78414 480 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 DCDP81605 110 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 DGCR2P98153 550 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 TLE1Q04724 770 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MAD2L1Q13257 205 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 BIKQ13323 160 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 AP5B1Q2VPB7 878 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 DEFB110Q30KQ9 67 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 TBC1D25Q3MII6 688 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 UGT3A2Q3SY77 523 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SPIN4Q56A73 249 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 TOR1AIP1Q5JTV8 583 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms