RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 OLFML2AQ68BL7 652 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 RFWD3Q6PCD5 774 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 ANKRD27Q96NW4 1050 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 INTS14Q96SY0 518 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 HSD17B14Q9BPX1 270 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 DBNDD1Q9H9R9 158 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 PDRG1Q9NUG6 133 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 ANAPC5Q9UJX4 755 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 SLC6A5Q9Y345 797 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 KLF2Q9Y5W3 355 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 NCOR2Q9Y618 2525 aa3.8□□□□□ -1.8
TOPBP1-206ENST00000508524 NOTCH2Q04721 2471 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 KIF7Q2M1P5 1343 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 VPS13AQ96RL7 3174 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 ANKDD1BA6NHY2 528 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 FOXI3A8MTJ6 420 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 LY6G6DO95868 133 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 IGHG3P01860 377 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 VIMP08670 466 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 CHRNA3P32297 505 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 PRKCIP41743 596 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 SLC1A6P48664 564 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 RPL34P49207 117 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 CAPZA1P52907 286 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 FKBP1BP68106 108 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 CEACAM7Q14002 265 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 ARMCX5Q6P1M9 558 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 CLEC4GQ6UXB4 293 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 SLFN11Q7Z7L1 901 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 ELMOD1Q8N336 334 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 C8orf46Q8TAG6 207 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 SIPA1Q96FS4 1042 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 ERO1AQ96HE7 468 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 CDX2Q99626 313 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 FERMT1Q9BQL6 677 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 CCM2Q9BSQ5 444 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 YTHDF1Q9BYJ9 559 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 PFDN4Q9NQP4 134 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 CUTCQ9NTM9 273 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 NYAP2Q9P242 653 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 ATP6V0A2Q9Y487 856 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 USP16Q9Y5T5 823 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 LAMB1P07942 1786 aa3.79□□□□□ -1.8
TOPBP1-206ENST00000508524 ABCC4O15439 1325 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 ZNF724A8MTY0 619 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 B4GAT1O43505 415 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 RPN1P04843 607 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 ZFYP08048 801 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 CCL5P13501 91 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 ZNF19P17023 458 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 ABRQ12979 859 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 LTB4RQ15722 352 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 ZNF776Q68DI1 518 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 TRAT1Q6PIZ9 186 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 PAMR1Q6UXH9 720 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 SPATA19Q7Z5L4 167 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 NLRP14Q86W24 1093 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 ZNF781Q8N8C0 355 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 SMYD1Q8NB12 490 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 FLVCR1-AS1Q8TAF5 88 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 EXOC4Q96A65 974 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 ZIM3Q96PE6 472 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 RAB3IPQ96QF0 476 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 MTIF3Q9H2K0 278 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 PNNQ9H307 717 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 MINDY3Q9H8M7 445 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 UBE2TQ9NPD8 197 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 SH3GLB2Q9NR46 395 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 ARMCX1Q9P291 453 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 CLIP2Q9UDT6 1046 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 FBXO7Q9Y3I1 522 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 HBS1LQ9Y450 684 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 DMXL1Q9Y485 3027 aa3.78□□□□□ -1.8
TOPBP1-206ENST00000508524 TPRP12270 2363 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 PFASO15067 1338 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 ZNF292O60281 2723 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 SIPA1L3O60292 1781 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 ILVBLA1L0T0 632 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 E2F3O00716 465 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 ACKR3P25106 362 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 IGLV3-21P80748 117 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 NAAAQ02083 359 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 FOLH1Q04609 750 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 SLC22A6Q4U2R8 563 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 ANKRD46Q86W74 232 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 CLEC1AQ8NC01 280 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 GPR148Q8TDV2 347 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 U2AF1L4Q8WU68 220 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 BADQ92934 168 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 SGF29Q96ES7 293 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 BSCL2Q96G97 398 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 SERINC2Q96SA4 455 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 TRIM7Q9C029 511 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 SLC39A8Q9C0K1 460 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 S100A14Q9HCY8 104 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 CLIC5Q9NZA1 410 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 GTF3C4Q9UKN8 822 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 LRRC37AA6NMS7 1700 aa3.77□□□□□ -1.81
TOPBP1-206ENST00000508524 MAST4O15021 2626 aa3.76□□□□□ -1.81
TOPBP1-206ENST00000508524 TRAV9-2A0A087WT02 112 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms