RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 THOC7Q6I9Y2 204 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 UNC5AQ6ZN44 842 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LINC00299Q6ZSB3 139 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SPATC1Q76KD6 591 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 YTHDF3Q7Z739 585 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TRAPPC6BQ86SZ2 158 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CCDC103Q8IW40 242 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OFCC1Q8IZS5 231 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CNTD1Q8N815 330 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 BCORP1Q8N888 145 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 MINDY2Q8NBR6 621 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SETD9Q8NE22 299 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR4C15Q8NGM1 316 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 DIO2Q92813 273 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 FAM71F1Q96KD3 344 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ORAI3Q9BRQ5 295 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TRIM51Q9BSJ1 452 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ASPNQ9BXN1 380 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 COMMD4Q9H0A8 199 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CDH20Q9HBT6 801 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SACM1LQ9NTJ5 587 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 POT1Q9NUX5 634 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OLAHQ9NV23 265 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NOP53Q9NZM5 478 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SALL4Q9UJQ4 1053 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LIPT1Q9Y234 373 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 POFUT2Q9Y2G5 429 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PLEKHM1Q9Y4G2 1056 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 D6RAR5 112 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SNPHO15079 494 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SEC14L5O43304 696 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CD48P09326 243 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 F3P13726 295 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF20P17024 532 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CHMP24386 653 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NCBP2P52298 156 aaKnown RBP eCLIP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 MALLQ13021 153 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ATP1A4Q13733 1029 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 IL11RAQ14626 422 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LASP1Q14847 261 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TIMM50Q3ZCQ8 353 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GPR33Q49SQ1 333 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RAB41Q5JT25 222 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 FCRL6Q6DN72 434 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 Q6ZVL8 140 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TMC3Q7Z5M5 1100 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ADIPOR2Q86V24 386 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF808Q8N4W9 903 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 C11orf65Q8NCR3 313 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GALNT11Q8NCW6 608 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR1J4Q8NGS1 313 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR51Q1Q8NH59 317 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RNF145Q96MT1 663 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 AMDHD1Q96NU7 426 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 KCNK17Q96T54 332 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ABCB10Q9NRK6 738 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 UCKL1Q9NWZ5 548 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 XPR1Q9UBH6 696 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ADGRE2Q9UHX3 823 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RALYQ9UKM9 306 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SARDHQ9UL12 918 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 KMT2EQ8IZD2 1858 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 A0A0X1KG70 313 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 hCG_1809904A0A1W2PP81 198 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1W2PPE2 198 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1W2PR64 198 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1W2PRV1 198 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 UBE2QL1A1L167 161 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CPSF4LA6NMK7 179 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TARM1B6A8C7 271 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 H3BQF6 201 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PHGDHO43175 533 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF254O75437 659 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 KHDRBS3O75525 346 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PGM3O95394 542 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ITGA2BP08514 1039 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NME1P15531 152 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ENDOUP21128 410 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LGALS4P56470 323 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR2B6P58173 313 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CDC42P60953 191 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GTF3C1Q12789 2109 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TOP3AQ13472 1001 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ARFRP1Q13795 201 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GTF2H2Q13888 395 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CA9Q16790 459 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 EIPR1Q53HC9 387 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 FAM180BQ6P0A1 224 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GTF2H2CQ6P1K8 395 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ABHD12BQ7Z5M8 362 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 THOC6Q86W42 341 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF567Q8N184 647 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF786Q8N393 782 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SVOPQ8N4V2 548 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PTGR2Q8N8N7 351 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR13C4Q8NGS5 318 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR2L2Q8NH16 312 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PPP1R35Q8TAP8 253 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PROKR1Q8TCW9 393 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RASSF5Q8WWW0 418 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms