RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 MCOLN1Q9GZU1 580 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 NEUROD4Q9HD90 331 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 IMPAD1Q9NX62 359 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 CLEC1BQ9P126 229 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 MAN2B1O00754 1011 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 FRS3O43559 492 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 PRICKLE3O43900 615 aaPredicted RBP13.69□□□□□ -0.22
DDX41-208ENST00000507955 CNOT3O75175 753 aaKnown RBP13.69□□□□□ -0.22
DDX41-208ENST00000507955 CLEC3AO75596 197 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 HSMCR30P0CW71 290 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 NR2F1P10589 423 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 GABRB1P18505 474 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 FRKP42685 505 aaPredicted RBP13.69□□□□□ -0.22
DDX41-208ENST00000507955 ST3GAL4Q11206 333 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 SLC9A5Q14940 896 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 AGERQ15109 404 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 ZNF770Q6IQ21 691 aaPredicted RBP13.69□□□□□ -0.22
DDX41-208ENST00000507955 NUDT18Q6ZVK8 323 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 SUN3Q8TAQ9 357 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 ELSPBP1Q96BH3 223 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 SLC28A3Q9HAS3 691 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 A4GALTQ9NPC4 353 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 TMEM74BQ9NUR3 256 aa13.69□□□□□ -0.22
DDX41-208ENST00000507955 PRSS38A1L453 326 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 METTL15A6NJ78 407 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 CLCA1A8K7I4 914 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 DSCR3O14972 297 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 OR10H3O60404 316 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 AIFM1O95831 613 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 PTHP01270 115 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 HMGN2P05204 90 aaKnown RBP13.68□□□□□ -0.22
DDX41-208ENST00000507955 HIST1H1TP22492 207 aaPredicted RBP13.68□□□□□ -0.22
DDX41-208ENST00000507955 PPP5CP53041 499 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 LTB4RQ15722 352 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 ABHD17CQ6PCB6 329 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 C11orf74Q86VG3 221 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 TMEFF1Q8IYR6 380 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 RAB42Q8N4Z0 105 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 B3GNT7Q8NFL0 401 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 PATE1Q8WXA2 126 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 KAT2AQ92830 837 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 SLC35B4Q969S0 331 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 TIMM29Q9BSF4 260 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 TMEM168Q9H0V1 697 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 ABCB10Q9NRK6 738 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 DZANK1Q9NVP4 752 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 ASB4Q9Y574 426 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 AIREO43918 545 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 EPPINO95925 133 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 PTNP21246 168 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 ATP5A1P25705 553 aaKnown RBP13.68□□□□□ -0.22
DDX41-208ENST00000507955 ELAVL4P26378 380 aaKnown RBP13.68□□□□□ -0.22
DDX41-208ENST00000507955 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
DDX41-208ENST00000507955 HMGA2P52926 109 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 FUT5Q11128 374 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 CARTPTQ16568 116 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 LYSMD2Q8IV50 215 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 MINDY2Q8NBR6 621 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 SLC7A13Q8TCU3 470 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 SLC35G5Q96KT7 338 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 QRFPRQ96P65 431 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 MAPKAP1Q9BPZ7 522 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 MIR1-1HGQ9H1L0 117 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 SEMA3GQ9NS98 782 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 QPCTLQ9NXS2 382 aa13.68□□□□□ -0.22
DDX41-208ENST00000507955 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.68□□□□□ -0.22
DDX41-208ENST00000507955 PRR19A6NJB7 356 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 CACNB4O00305 520 aaPredicted RBP13.67□□□□□ -0.22
DDX41-208ENST00000507955 MRPS14O60783 128 aaKnown RBP13.67□□□□□ -0.22
DDX41-208ENST00000507955 CHRM4P08173 479 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 ALOX5P09917 674 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 KCNJ5P48544 419 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 TMED10P49755 219 aaKnown RBP13.67□□□□□ -0.22
DDX41-208ENST00000507955 ZIC1Q15915 447 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 TIGD6Q17RP2 521 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 FRMPD2BQ6IN97 320 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 OR4N5Q8IXE1 308 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 CLIP4Q8N3C7 705 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 IQCF1Q8N6M8 205 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 FAM83FQ8NEG4 500 aaPredicted RBP13.67□□□□□ -0.22
DDX41-208ENST00000507955 LCN9Q8WX39 176 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 HTRA1Q92743 480 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 COL26A1Q96A83 441 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 DACH2Q96NX9 599 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 FKBP14Q9NWM8 211 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 ZNF624Q9P2J8 865 aaPredicted RBP13.67□□□□□ -0.22
DDX41-208ENST00000507955 H3BN98 237 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 KDM1AO60341 852 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 ASGR2P07307 311 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 DBTP11182 482 aaKnown RBP13.67□□□□□ -0.22
DDX41-208ENST00000507955 SEPHS1P49903 392 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 CRISP1P54107 249 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 BTN3A2P78410 334 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 HOXC5Q00444 222 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 SELENBP1Q13228 472 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 ZNF404Q494X3 552 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 FLCNQ8NFG4 579 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 OR9A2Q8NGT5 310 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 SIPA1Q96FS4 1042 aa13.67□□□□□ -0.22
DDX41-208ENST00000507955 OR5M11Q96RB7 305 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms