RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 DPCDQ9BVM2 203 aaPredicted RBP16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 HDHD2Q9H0R4 259 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 PPA2Q9H2U2 334 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 UBQLN2Q9UHD9 624 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 RWDD3Q9Y3V2 267 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 FKBP7Q9Y680 259 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 ATP6V1G2-DDX39BF2Z307 99 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 K7ERQ8 282 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 SH3BP5O60239 455 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 APOL3O95236 402 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 LIMS3P0CW19 117 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 LIMS4P0CW20 117 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 CORO1AP31146 461 aaKnown RBP16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 NNMTP40261 264 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 DSTNP60981 165 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 CSTF1Q05048 431 aaKnown RBP16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 DSC1Q08554 894 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 RPA4Q13156 261 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 ARHGAP15Q53QZ3 475 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 ACSM5Q6NUN0 579 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 KIAA1324Q6UXG2 1013 aaKnown RBP16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 ZNF783Q6ZMS7 281 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 RASGRP3Q8IV61 690 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 ZFP41Q8N8Y5 198 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 NEIL3Q8TAT5 605 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 SLC7A13Q8TCU3 470 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 CLP1Q92989 425 aaKnown RBP16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 RBP7Q96R05 134 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 IRGMA1A4Y4 181 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 MTMR11A4FU01 709 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 OR12D1P0DN82 309 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 TFPIP10646 304 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 CXCL3P19876 107 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 GIPRP48546 466 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 MC1RQ01726 317 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 HSF2Q03933 536 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 BCL2L1Q07817 233 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 GINS1Q14691 196 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 PLEKHS1Q5SXH7 462 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 ADGRF1Q5T601 910 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 RAET1GQ6H3X3 334 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 C17orf99Q6UX52 265 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 CD300LDQ6UXZ3 194 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 ADGRD2Q7Z7M1 963 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 SERINC5Q86VE9 423 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 CHFRQ96EP1 664 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 RNFT2Q96EX2 444 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 PDXPQ96GD0 296 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 ZSWIM3Q96MP5 696 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 ABCG5Q9H222 651 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 TNFRSF10DQ9UBN6 386 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 EXTL2Q9UBQ6 330 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 ACAD8Q9UKU7 415 aa16.19■□□□□ 0.18
SQSTM1-211ENST00000506690 STC2O76061 302 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 LALBAP00709 142 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 CD79BP40259 229 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 RPS13P62277 151 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 RPS26P11Q5JNZ5 115 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 KIAA1211LQ6NV74 962 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 TMEM91Q6ZNR0 172 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 OTOP2Q7RTS6 562 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 MARCH9Q86YJ5 346 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 IFNL1Q8IU54 200 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 DTX3Q8N9I9 347 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 PCNPQ8WW12 178 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 OTULINQ96BN8 352 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 PPCDCQ96CD2 204 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 ZNF578Q96N58 590 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 OR4K3Q96R72 315 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 CLEC4MQ9H2X3 399 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 TMEM161AQ9NX61 479 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 EXOSC1Q9Y3B2 195 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 GABRPO00591 440 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 TSPAN4O14817 238 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 PRODHO43272 600 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 GKP32189 559 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 SOX18P35713 384 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 CTAG1AP78358 180 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 CDK5Q00535 292 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 UBE3AQ05086 875 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 COX10Q12887 443 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 CAMK2DQ13557 499 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 ASB18Q6ZVZ8 466 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 PMEPA1Q969W9 287 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 RFT1Q96AA3 541 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 THAP7Q9BT49 309 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 C11orf49Q9H6J7 331 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 PRG3Q9Y2Y8 225 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 Q9Y3F1 56 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 OR51B4Q9Y5P0 310 aa16.18■□□□□ 0.18
SQSTM1-211ENST00000506690 SYN3O14994 580 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 HLA-DPB1P04440 258 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 ICAM2P13598 275 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 OR1G1P47890 313 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 EPHA5P54756 1037 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 PRSS53Q2L4Q9 553 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 PRICKLE2Q7Z3G6 844 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 LUZP2Q86TE4 346 aa16.17■□□□□ 0.18
SQSTM1-211ENST00000506690 RBM45Q8IUH3 476 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms