RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 GIN1Q9NXP7 522 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 FTSJ1Q9UET6 329 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 RARRES3Q9UL19 164 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 C19orf53Q9UNZ5 99 aaPredicted RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 USP22Q9UPT9 525 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 LIPT1Q9Y234 373 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 MAP4K5Q9Y4K4 846 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 MMACHCQ9Y4U1 282 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 A0A1B0GX78 115 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ZNF860A6NHJ4 632 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 UPK1AO00322 258 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ASNA1O43681 348 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 HYAL3O43820 417 aaPredicted RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 LDB3O75112 727 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 PDE9AO76083 593 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 TFPTP0C1Z6 253 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ARAFP10398 606 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 CDK4P11802 303 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 FGF5P12034 268 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 FASP25445 335 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 CSTF2P33240 577 aaKnown RBP eCLIP9.51□□□□□ -0.89
DDX41-203ENST00000504781 SOAT1P35610 550 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 VHLP40337 213 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 SELENOWP63302 87 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 MC2RQ01718 297 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 STX4Q12846 297 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 SLC13A2Q13183 592 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 DSG2Q14126 1118 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 PRICKLE4Q2TBC4 344 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ZNF750Q32MQ0 723 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 TBCELQ5QJ74 424 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 PRAMEF8Q5VWM4 474 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 PRAMEF7Q5VXH5 474 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 UNQ6494/PRO21346Q6UXR6 183 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 RNF111Q6ZNA4 994 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 LRRC74BQ6ZQY2 392 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 CBLL1Q75N03 491 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 PIP4P1Q86T03 277 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 PATL1Q86TB9 770 aaKnown RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 PACS2Q86VP3 889 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ZC3H7AQ8IWR0 971 aaKnown RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 OR4N5Q8IXE1 308 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ST13P4Q8IZP2 240 aaPredicted RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 CLEC4FQ8N1N0 589 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 AGBL5Q8NDL9 886 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 CATSPER1Q8NEC5 780 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ADCY4Q8NFM4 1077 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 OR5AK3PQ8NH89 298 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 PNPT1Q8TCS8 783 aaKnown RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 PMM1Q92871 262 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 NCLNQ969V3 563 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 COL26A1Q96A83 441 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 PEX11GQ96HA9 241 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 CCDC74BQ96LY2 380 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 OR6C1Q96RD1 312 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 CHID1Q9BWS9 393 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ACTRT3Q9BYD9 372 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ALOXE3Q9BYJ1 711 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 ASPSCR1Q9BZE9 553 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 SLC7A5P2Q9GIP4 190 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 TGIF2Q9GZN2 237 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 MKKSQ9NPJ1 570 aaPredicted RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 CALML5Q9NZT1 146 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 AKAP7Q9P0M2 348 aaPredicted RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 CNOT11Q9UKZ1 510 aaKnown RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 LRRC42Q9Y546 428 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 PCDHGB3Q9Y5G1 929 aa9.51□□□□□ -0.89
DDX41-203ENST00000504781 MAP1BP46821 2468 aaKnown RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 ASCC3Q8N3C0 2202 aaKnown RBP9.51□□□□□ -0.89
DDX41-203ENST00000504781 A0A0G2JPF8 293 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 TTC36A6NLP5 189 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 HNRNPCL2B2RXH8 293 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 HNRNPCL3B7ZW38 293 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 D6RAR5 112 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 M0QX08 132 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 HMGN4O00479 90 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 FGF17O60258 216 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 B4GALT2O60909 372 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 CBFA2T3O75081 653 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 SERPINB7O75635 380 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 PRKD3O94806 890 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 SERPINA1P01009 418 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 C1QCP02747 245 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 HMGN2P05204 90 aaKnown RBP9.5□□□□□ -0.89
DDX41-203ENST00000504781 HNRNPCL4P0DMR1 293 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 CCKBRP32239 447 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 RORAP35398 523 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 ERFP50548 548 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 CLCN2P51788 898 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 PRKAG1P54619 331 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 DUSP2Q05923 314 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 SCARB2Q14108 478 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 C16orf72Q14CZ0 275 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 TRIP6Q15654 476 aaKnown RBP9.5□□□□□ -0.89
DDX41-203ENST00000504781 ZNF628Q5EBL2 1059 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 FHL5Q5TD97 284 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 CDC73Q6P1J9 531 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 PPP1R3BQ86XI6 285 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 LGI4Q8N135 537 aa9.5□□□□□ -0.89
DDX41-203ENST00000504781 HORMAD2Q8N7B1 307 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms