RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MMP17Q9ULZ9 603 aa13.35□□□□□ -0.27
TCOF1-207ENST00000504761 TRPM6Q9BX84 2022 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 EFCAB9A8MZ26 197 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 BCAT2O15382 392 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-207ENST00000504761 ARHGEF9O43307 516 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 CISD3P0C7P0 127 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 ACVR2AP27037 513 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 GPR4P46093 362 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 XCR1P46094 333 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 OR1D4P47884 311 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 SELENOWP63302 87 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 DLX2Q07687 328 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-207ENST00000504761 MESP2Q0VG99 397 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 PYDC2Q56P42 97 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 OLIG3Q7RTU3 272 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 OAFQ86UD1 273 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 KLHL6Q8WZ60 621 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 OSBPL10Q9BXB5 764 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 PLGRKTQ9HBL7 147 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 TRNAU1APQ9NX07 287 aaKnown RBP13.34□□□□□ -0.27
TCOF1-207ENST00000504761 TCRBV3S1A0A5B6 114 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 C8BP07358 591 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 RHCEP18577 417 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 CSNK1G2P78368 415 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 DPTQ07507 201 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 CLCA4Q14CN2 919 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 PYCR3Q53H96 274 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 XKR7Q5GH72 579 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 PRSS36Q5K4E3 855 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 AGBL4Q5VU57 503 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 CXXC5Q7LFL8 322 aaKnown RBP13.34□□□□□ -0.27
TCOF1-207ENST00000504761 SLC37A2Q8TED4 501 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 SERINC2Q96SA4 455 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 BRD7Q9NPI1 651 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 MGAT4BQ9UQ53 548 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 PCDHA9Q9Y5H5 950 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 A0A1W2PPW3 197 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 SLC19A1P41440 591 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 MAP2K4P45985 399 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 MAT1AQ00266 395 aaKnown RBP13.34□□□□□ -0.27
TCOF1-207ENST00000504761 COX10Q12887 443 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 GK3PQ14409 553 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 RGS21Q2M5E4 152 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 ZBED5Q49AG3 693 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 SLC36A4Q6YBV0 504 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 OR4K5Q8NGD3 323 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 METTL7AQ9H8H3 244 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 PRODH2Q9UF12 536 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 BTBD3Q9Y2F9 522 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 ENPP4Q9Y6X5 453 aa13.34□□□□□ -0.27
TCOF1-207ENST00000504761 IRGMA1A4Y4 181 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 SOX30O94993 753 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 AIFM1O95831 613 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 GIMD1P0DJR0 217 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 LRIT3Q3SXY7 679 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 HSF5Q4G112 596 aaPredicted RBP13.33□□□□□ -0.27
TCOF1-207ENST00000504761 KLHL22Q53GT1 634 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 CPZQ66K79 652 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 RNF111Q6ZNA4 994 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 MMP21Q8N119 569 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 MARVELD2Q8N4S9 558 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 DEFB123Q8N688 67 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 RAB2BQ8WUD1 216 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 IFT52Q9Y366 437 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 PLXNA1Q9UIW2 1896 aa13.33□□□□□ -0.27
TCOF1-207ENST00000504761 M0R129 80 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 FOXE1O00358 373 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 B4GAT1O43505 415 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 RCBTB2O95199 551 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 CKMT1AP12532 417 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 BMP1P13497 986 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 TMED10P49755 219 aaKnown RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 ST3GAL4Q11206 333 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 EIF4EBP2Q13542 120 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 NUP54Q7Z3B4 507 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 SERPINA11Q86U17 422 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 PRR22Q8IZ63 422 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 GAL3ST1Q99999 423 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 ACTRT3Q9BYD9 372 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 QRSL1Q9H0R6 528 aaKnown RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 NCDNQ9UBB6 729 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 RARRES3Q9UL19 164 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 WDR37Q9Y2I8 494 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 EP300Q09472 2414 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 A0A1B0GVT2 93 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 LOC110117498-PIK3R3F6TDL0 507 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 PGRMC2O15173 223 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 AQP9O43315 295 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 NARSO43776 548 aaKnown RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 CD1EP15812 388 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 YBX1P67809 324 aaKnown RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 HORMAD2Q8N7B1 307 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 GOLM1Q8NBJ4 401 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 MS4A8Q9BY19 250 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 TRIM2Q9C040 744 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 POT1Q9NUX5 634 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 ERVK-18Q9QC07 812 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 ABCG2Q9UNQ0 655 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms