RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 NOCTQ9UK39 431 aaKnown RBP3.92□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ACSL5Q9ULC5 683 aa3.92□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RUVBL2Q9Y230 463 aaKnown RBP3.92□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NFE2L3Q9Y4A8 694 aa3.92□□□□□ -1.78
PDLIM1P4-201ENST00000504327 LRP12Q9Y561 859 aa3.92□□□□□ -1.78
PDLIM1P4-201ENST00000504327 STON1Q9Y6Q2 735 aa3.92□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ATAD5Q96QE3 1844 aa3.92□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PFASO15067 1338 aa3.92□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RAD50Q92878 1312 aa3.92□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CASP8AP2Q9UKL3 1982 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TRBV5-7A0A0A0MS05 114 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ERICH2A1L162 156 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 BTBD17A6NE02 478 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TMEM150CB9EJG8 249 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 WASH3PC4AMC7 463 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TMEM189-UBE2V1I3L0A0 370 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 J3QR06 171 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ADAM12O43184 909 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FCMRO60667 390 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 LRP3O75074 770 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RPS6KA5O75582 802 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RGS11O94810 467 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NDUFB4O95168 129 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 GSRP00390 522 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 IGHV2-70P01814 119 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CHRNA1P02708 482 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CRYGCP07315 174 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CAPN1P07384 714 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NGFRP08138 427 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SERPINF2P08697 491 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SP9P0CG40 484 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 T-ENOLP0DO92 83 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 HPGDP15428 266 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 DGKAP23743 735 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 HRH2P25021 359 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NMT1P30419 496 aaKnown RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 AXLP30530 894 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 OR1D2P34982 312 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PTGFRP43088 359 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TNFRSF4P43489 277 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ACADVLP49748 655 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PPT1P50897 306 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MMP15P51511 669 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CRYBB1P53674 252 aaPredicted RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RAD23BP54727 409 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CLDN8P56748 225 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 TPM4P67936 248 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RPP38P78345 283 aaKnown RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CTAG1AP78358 180 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CNTN2Q02246 1040 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MBTD1Q05BQ5 628 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SLC3A1Q07837 685 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 IL10RBQ08334 325 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 DSC1Q08554 894 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FGL1Q08830 312 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 BST1Q10588 318 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 BNIP1Q12981 228 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 DMP1Q13316 513 aaPredicted RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PPIL2Q13356 520 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 UBE2V1Q13404 147 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 COTL1Q14019 142 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SELPLGQ14242 412 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NPTX1Q15818 432 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CHRNA6Q15825 494 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PCK2Q16822 640 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FAM83EQ2M2I3 478 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SBK1Q52WX2 424 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CMPK2Q5EBM0 449 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ZNF311Q5JNZ3 666 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 LRRC66Q68CR7 880 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 UGT3A1Q6NUS8 523 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NIPAL3Q6P499 406 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CBLN3Q6UW01 205 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SYT10Q6XYQ8 523 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 Q6ZTK2 550 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SERPINA11Q86U17 422 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 CD302Q8IX05 232 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FBXL14Q8N1E6 418 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 EMC1Q8N766 993 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 LRRC57Q8N9N7 239 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FAM81AQ8TBF8 368 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MITD1Q8WV92 249 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 EMG1Q92979 244 aaKnown RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 URB1-AS1Q96HZ7 61 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 FAM71F1Q96KD3 344 aaPredicted RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 GUCD1Q96NT3 240 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 VPS35Q96QK1 796 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SLC22A12Q96S37 553 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NPY6RQ99463 290 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MTERF1Q99551 399 aaKnown RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 NPAS2Q99743 824 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 ALKBH7Q9BT30 221 aaPredicted RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 LMF2Q9BU23 707 aaKnown RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 MSTO1Q9BUK6 570 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 DNTTIP1Q9H147 329 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 PPP1R3EQ9H7J1 279 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 SGK2Q9HBY8 427 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RAB9BQ9NP90 201 aa3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 KRCC1Q9NPI7 259 aaPredicted RBP3.91□□□□□ -1.78
PDLIM1P4-201ENST00000504327 RNF146Q9NTX7 359 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms