RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 CPMP14384 443 aa17.12■□□□□ 0.33
LINC00535-201ENST00000501400 SPIBQ01892 262 aa17.12■□□□□ 0.33
LINC00535-201ENST00000501400 MAMSTRQ6ZN01 415 aa17.12■□□□□ 0.33
LINC00535-201ENST00000501400 SAMD14Q8IZD0 417 aaPredicted RBP17.12■□□□□ 0.33
LINC00535-201ENST00000501400 PIK3C3Q8NEB9 887 aa17.12■□□□□ 0.33
LINC00535-201ENST00000501400 OR9A4Q8NGU2 314 aa17.12■□□□□ 0.33
LINC00535-201ENST00000501400 WFDC6Q9BQY6 131 aa17.12■□□□□ 0.33
LINC00535-201ENST00000501400 C3orf14Q9HBI5 128 aa17.12■□□□□ 0.33
LINC00535-201ENST00000501400 BCL2L10Q9HD36 194 aa17.12■□□□□ 0.33
LINC00535-201ENST00000501400 EXD2Q9NVH0 621 aa17.12■□□□□ 0.33
LINC00535-201ENST00000501400 FAM227AF5H4B4 570 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 TNFRSF11BO00300 401 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 SLC16A6O15403 523 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 SEMA7AO75326 666 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 JRKO75564 520 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 LIMS1P48059 325 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 KCNJ5P48544 419 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 FNTBP49356 437 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 BNC1Q01954 994 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 KCNC4Q03721 635 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 PRPF38BQ5VTL8 546 aaKnown RBP17.11■□□□□ 0.33
LINC00535-201ENST00000501400 OR2L13Q8N349 312 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 OR4D11Q8NGI4 311 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 COL26A1Q96A83 441 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 TCTN2Q96GX1 697 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 ZNF285Q96NJ3 590 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 TGM7Q96PF1 710 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 PIP5K1AQ99755 562 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 GRIP2Q9C0E4 1043 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 PCDHGA8Q9Y5G5 932 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 ARID1BQ8NFD5 2236 aaPredicted RBP17.11■□□□□ 0.33
LINC00535-201ENST00000501400 ASXL3Q9C0F0 2248 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 IGHV5-51A0A0C4DH38 117 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 LOC100130705A0A1B0GUX0 176 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 TMEM247A6NEH6 219 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 TRIM64CA6NLI5 447 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 IFNW1P05000 195 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 PABPC4LP0CB38 370 aaKnown RBP17.11■□□□□ 0.33
LINC00535-201ENST00000501400 ITGA2P17301 1181 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 ELK4P28324 431 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 PPP2R1BP30154 601 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 RPL5P46777 297 aaKnown RBP17.11■□□□□ 0.33
LINC00535-201ENST00000501400 ANXA11P50995 505 aaKnown RBP17.11■□□□□ 0.33
LINC00535-201ENST00000501400 CRISP3P54108 245 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 CDH12P55289 794 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 BNIP3Q12983 259 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 ZNF628Q5EBL2 1059 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 C6orf132Q5T0Z8 1188 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 NKAIN2Q5VXU1 208 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 WDR53Q7Z5U6 358 aaPredicted RBP17.11■□□□□ 0.33
LINC00535-201ENST00000501400 SLC25A45Q8N413 288 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 ZNF555Q8NEP9 628 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 BBS10Q8TAM1 723 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 MS4A4EQ96PG1 132 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 NPLQ9BXD5 320 aaPredicted RBP17.11■□□□□ 0.33
LINC00535-201ENST00000501400 FAM192AQ9GZU8 254 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 DDX18Q9NVP1 670 aaKnown RBP17.11■□□□□ 0.33
LINC00535-201ENST00000501400 KCND3Q9UK17 655 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 ORC6Q9Y5N6 252 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 CABIN1Q9Y6J0 2220 aa17.11■□□□□ 0.33
LINC00535-201ENST00000501400 TLCD2A6NGC4 264 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 FFAR1O14842 300 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 ASNA1O43681 348 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 EPPINO95925 133 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 TDGF1P13385 188 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 PORP16435 677 aaPredicted RBP17.1■□□□□ 0.33
LINC00535-201ENST00000501400 HOXA6P31267 233 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 CTSKP43235 329 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 EPHA4P54764 986 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 RAB38P57729 211 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 SHBQ15464 509 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 EXOC3L2Q2M3D2 409 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 NADK2Q4G0N4 442 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 FHL5Q5TD97 284 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 ZNF691Q5VV52 312 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 MFSD12Q6NUT3 480 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 THAP5Q7Z6K1 395 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 C8orf59Q8N0T1 100 aaPredicted RBP17.1■□□□□ 0.33
LINC00535-201ENST00000501400 ATG16L2Q8NAA4 619 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 ZNF354BQ96LW1 612 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 ZNF607Q96SK3 696 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 ACER3Q9NUN7 267 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 KIF17Q9P2E2 1029 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 SEC14L3Q9UDX4 400 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 SPACA6W5XKT8 324 aa17.1■□□□□ 0.33
LINC00535-201ENST00000501400 E9PQ18 207 aa17.09■□□□□ 0.33
LINC00535-201ENST00000501400 FOXS1O43638 330 aa17.09■□□□□ 0.33
LINC00535-201ENST00000501400 SRPX2O60687 465 aaPredicted RBP17.09■□□□□ 0.33
LINC00535-201ENST00000501400 ATP1B1P05026 303 aa17.09■□□□□ 0.33
LINC00535-201ENST00000501400 CYP4B1P13584 511 aa17.09■□□□□ 0.33
LINC00535-201ENST00000501400 RHCEP18577 417 aa17.09■□□□□ 0.33
LINC00535-201ENST00000501400 EPHA2P29317 976 aa17.09■□□□□ 0.33
LINC00535-201ENST00000501400 CLK3P49761 638 aaKnown RBP17.09■□□□□ 0.33
LINC00535-201ENST00000501400 SRSF5Q13243 272 aaKnown RBP17.09■□□□□ 0.33
LINC00535-201ENST00000501400 GANABQ14697 944 aaKnown RBP17.09■□□□□ 0.33
LINC00535-201ENST00000501400 CTU2Q2VPK5 515 aaKnown RBP17.09■□□□□ 0.33
LINC00535-201ENST00000501400 HMGN2P46Q86SG4 172 aa17.09■□□□□ 0.33
LINC00535-201ENST00000501400 RBM45Q8IUH3 476 aaKnown RBP17.09■□□□□ 0.33
LINC00535-201ENST00000501400 LACC1Q8IV20 430 aa17.09■□□□□ 0.33
LINC00535-201ENST00000501400 SLC35F3Q8IY50 421 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms