RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 SPPL2CQ8IUH8 684 aa17.24■□□□□ 0.35
RPN1-208ENST00000497415 LRRC25Q8N386 305 aaPredicted RBP17.24■□□□□ 0.35
RPN1-208ENST00000497415 VWA5B2Q8N398 1253 aa17.24■□□□□ 0.35
RPN1-208ENST00000497415 C17orf47Q8NEP4 570 aa17.24■□□□□ 0.35
RPN1-208ENST00000497415 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.24■□□□□ 0.35
RPN1-208ENST00000497415 PAQR8Q8TEZ7 354 aa17.24■□□□□ 0.35
RPN1-208ENST00000497415 METTL2AQ96IZ6 378 aaKnown RBP17.24■□□□□ 0.35
RPN1-208ENST00000497415 FAM173AQ9BQD7 235 aa17.24■□□□□ 0.35
RPN1-208ENST00000497415 SHCBP1LQ9BZQ2 653 aa17.24■□□□□ 0.35
RPN1-208ENST00000497415 RRAGDQ9NQL2 400 aaPredicted RBP17.24■□□□□ 0.35
RPN1-208ENST00000497415 EHD3Q9NZN3 535 aa17.24■□□□□ 0.35
RPN1-208ENST00000497415 ZNF780BQ9Y6R6 833 aa17.24■□□□□ 0.35
RPN1-208ENST00000497415 TRGV8A0A0C4DH27 118 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 A0A0G2JMM0 328 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 A0A1W2PPB8 328 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 A0A1W2PRS3 328 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 KIR3DP1A8MWS1 328 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 TFECO14948 347 aaPredicted RBP17.23■□□□□ 0.35
RPN1-208ENST00000497415 AZIN1O14977 448 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 TYROBPO43914 113 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 HS6ST1O60243 411 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 NPHS1O60500 1241 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 P04436 131 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 FGF4P08620 206 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 CCL3P10147 92 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 ZNF763Q0D2J5 394 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 CEBPEQ15744 281 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 CMPK2Q5EBM0 449 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 SLC22A10Q63ZE4 541 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 FAM180BQ6P0A1 224 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 RGS9BPQ6ZS82 235 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 GK5Q6ZS86 529 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 HOMEZQ8IX15 550 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 SAMD14Q8IZD0 417 aaPredicted RBP17.23■□□□□ 0.35
RPN1-208ENST00000497415 TAGAPQ8N103 731 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 ZNF675Q8TD23 568 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 MECRQ9BV79 373 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 EBPLQ9BY08 206 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 BRINP2Q9C0B6 783 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 PLSCR2Q9NRY7 297 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 SENP1Q9P0U3 644 aa17.23■□□□□ 0.35
RPN1-208ENST00000497415 WBP11Q9Y2W2 641 aaKnown RBP17.23■□□□□ 0.35
RPN1-208ENST00000497415 GLSO94925 669 aaPredicted RBP17.22■□□□□ 0.35
RPN1-208ENST00000497415 CLDN1O95832 211 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 GPX3P22352 226 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 PTGER1P34995 402 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 ETV4P43268 484 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 NR0B1P51843 470 aaKnown RBP17.22■□□□□ 0.35
RPN1-208ENST00000497415 HSF1Q00613 529 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 FOXO1Q12778 655 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 DUSP8Q13202 625 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 KIAA0040Q15053 153 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 C3AR1Q16581 482 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 NTRK2Q16620 822 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 HYAL4Q2M3T9 481 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 KRT71Q3SY84 523 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 HLA-DQA1Q5Y7H0 255 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 KANK2Q63ZY3 851 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 FAM47EQ6ZV65 393 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 FGD2Q7Z6J4 655 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 ADCY4Q8NFM4 1077 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 OR52N2Q8NGI0 321 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 MAGED4Q96JG8 741 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 TTTY12Q9BZ98 90 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 ZDHHC11Q9H8X9 412 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 CNIH4Q9P003 139 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 CFL2Q9Y281 166 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 CHCHD2Q9Y6H1 151 aaPredicted RBP17.22■□□□□ 0.35
RPN1-208ENST00000497415 EXPH5Q8NEV8 1989 aa17.22■□□□□ 0.35
RPN1-208ENST00000497415 CYSRT1A8MQ03 144 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 G3V3Y1 287 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 SLC28A1O00337 649 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 CCL21O00585 134 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 ZG16O60844 167 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 CBX7O95931 251 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 DDCP20711 480 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 PPIAP62937 165 aaKnown RBP17.21■□□□□ 0.35
RPN1-208ENST00000497415 LTB4RQ15722 352 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 TRMT12Q53H54 448 aaKnown RBP17.21■□□□□ 0.35
RPN1-208ENST00000497415 ZNF628Q5EBL2 1059 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 FAM71E1Q6IPT2 247 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 NOXRED1Q6NXP6 359 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 Q6ZSR9 355 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 MAMDC2Q7Z304 686 aaPredicted RBP17.21■□□□□ 0.35
RPN1-208ENST00000497415 CCDC116Q8IYX3 515 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 FBXW8Q8N3Y1 598 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 SIMC1Q8NDZ2 872 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 OR6Y1Q8NGX8 325 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 EXOSC8Q96B26 276 aaKnown RBP17.21■□□□□ 0.35
RPN1-208ENST00000497415 TUBB1Q9H4B7 451 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 IL1RL2Q9HB29 575 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 PROK2Q9HC23 129 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 MYNNQ9NPC7 610 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 SLC35C2Q9NQQ7 365 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 TAS2R7Q9NYW3 318 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 DTX4Q9Y2E6 619 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 POLR3HQ9Y535 204 aaPredicted RBP17.21■□□□□ 0.35
RPN1-208ENST00000497415 DNAJC15Q9Y5T4 150 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 NPFFR2Q9Y5X5 522 aa17.21■□□□□ 0.35
RPN1-208ENST00000497415 NINQ8N4C6 2090 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms