RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 DUTP33316 252 aaKnown RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 TRIM23P36406 574 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 ALDH3B1P43353 468 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 MTIF2P46199 727 aaKnown RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SMSP52788 366 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 NUDT6P53370 316 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 CLDN6P56747 220 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 CX3CL1P78423 397 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SSBP2P81877 361 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 DGCR2P98153 550 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZXDBP98169 803 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 RASGEF1BQ0VAM2 473 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 HSPA14Q0VDF9 509 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 COX10Q12887 443 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 TRAF1Q13077 416 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SNTB2Q13425 540 aaKnown RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 GPR50Q13585 617 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 RAPSNQ13702 412 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 GCKRQ14397 625 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 LSM12Q3MHD2 195 aaKnown RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 CFAP221Q4G0U5 840 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 BOLA3Q53S33 107 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 C20orf194Q5TEA3 1177 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 IL23RQ5VWK5 629 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SIGLEC15Q6ZMC9 328 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 TGIF2LYQ8IUE0 185 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZDHHC21Q8IVQ6 265 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 FAM114A1Q8IWE2 563 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 MMD2Q8IY49 270 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZNF444Q8N0Y2 327 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SLC39A11Q8N1S5 342 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 OTUD6BQ8N6M0 293 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 STKLD1Q8NE28 680 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 OR4K1Q8NGD4 311 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 OR10Q1Q8NGQ4 319 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 OR52N5Q8NH56 324 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SETD7Q8WTS6 366 aaKnown RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 PDCD6IPQ8WUM4 868 aaKnown RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 RND1Q92730 232 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 FGF13Q92913 245 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 GLYATL1Q969I3 302 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 ABTB1Q969K4 478 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 FAM46BQ96A09 425 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 PHF21AQ96BD5 680 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 PYCR2Q96C36 320 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 PGM2Q96G03 612 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 C16orf58Q96GQ5 468 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SECISBP2Q96T21 854 aaKnown RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 CSF3RQ99062 836 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 S1PR3Q99500 378 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 NDNQ99608 321 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 NTMT1Q9BV86 223 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZNF416Q9BWM5 594 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 LRRC2Q9BYS8 371 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZBP1Q9H171 429 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 GANQ9H2C0 597 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SEMA6AQ9H2E6 1030 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 RWDD1Q9H446 243 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 AAMDCQ9H7C9 122 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 UBTD1Q9HAC8 227 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 RAVER2Q9HCJ3 691 aaKnown RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 VAT1LQ9HCJ6 419 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 PHPT1Q9NRX4 125 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SLC38A7Q9NVC3 462 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 HYPKQ9NX55 129 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 MIOSQ9NXC5 875 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 PKD2L2Q9NZM6 624 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 C6orf203Q9P0P8 240 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 VPS54Q9P1Q0 977 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 C11orf21Q9P2W6 132 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 NUDCQ9Y266 331 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 AMDHD2Q9Y303 409 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 SPIN1Q9Y657 262 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 TENM2Q9NT68 2774 aa2.22□□□□□ -2.05
CKS1BP2-201ENST00000497342 NCANO14594 1321 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 SF3B1O75533 1304 aaKnown RBP eCLIP2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 HELZP42694 1942 aaKnown RBP2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 MYH2Q9UKX2 1941 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 C15orf38-AP3S2A0A0A6YYH1 394 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 TMEM89A2RUT3 159 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZSCAN5BA6NJL1 495 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 KCNU1A8MYU2 1149 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 H0Y8G0 127 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 H0YIV9 168 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 L7N2F9 121 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 LGALS8O00214 317 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF197O14709 1029 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 XPO1O14980 1071 aaKnown RBP2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 MID1O15344 667 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 ADAM12O43184 909 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 PSMD3O43242 534 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 GMFGO60234 142 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 CACNG3O60359 315 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 ACSL4O60488 711 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 VPS26AO75436 327 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 SCGB2A1O75556 95 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 TOM1L1O75674 476 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 KDM4BO94953 1096 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 CPNE6O95741 557 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms