RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 LBX1P52954 281 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 POLR2LP62875 67 aaKnown RBP3.38□□□□□ -1.87
TRIM4-205ENST00000496896 IL9RQ01113 521 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 BFSP1Q12934 665 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 BNIP1Q12981 228 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 PTK6Q13882 451 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 WDR78Q5VTH9 848 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 TTC19Q6DKK2 380 aaPredicted RBP3.38□□□□□ -1.87
TRIM4-205ENST00000496896 CCDC137Q6PK04 289 aaKnown RBP3.38□□□□□ -1.87
TRIM4-205ENST00000496896 LCLAT1Q6UWP7 414 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 NIPA1Q7RTP0 329 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 SPATA21Q7Z572 469 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 PRPF39Q86UA1 669 aaKnown RBP3.38□□□□□ -1.87
TRIM4-205ENST00000496896 CATSPER3Q86XQ3 398 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 POMGNT2Q8NAT1 580 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 GMCL1P1Q8NEA9 526 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 C11orf45Q8TAV5 145 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 NPRL2Q8WTW4 380 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 U2AF1L4Q8WU68 220 aaKnown RBP3.38□□□□□ -1.87
TRIM4-205ENST00000496896 CHURC1Q8WUH1 139 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 TEKT4Q8WW24 435 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 DYDC1Q8WWB3 177 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 CKAP2Q8WWK9 683 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 DYNLL2Q96FJ2 89 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 SNF8Q96H20 258 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 CFAP57Q96MR6 1250 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 FAM218AQ96MZ4 157 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 RIT2Q99578 217 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 CDCA3Q99618 268 aaPredicted RBP3.38□□□□□ -1.87
TRIM4-205ENST00000496896 CPNE1Q99829 537 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 AGPAT1Q99943 283 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 APOL6Q9BWW8 343 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 AP1M1Q9BXS5 423 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 KLHL4Q9C0H6 718 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 DEFB129Q9H1M3 183 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 MMADHCQ9H3L0 296 aaPredicted RBP3.38□□□□□ -1.87
TRIM4-205ENST00000496896 TUBB1Q9H4B7 451 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 GNB4Q9HAV0 340 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 CD209Q9NNX6 404 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 SAR1AQ9NR31 198 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.38□□□□□ -1.87
TRIM4-205ENST00000496896 LNPEPQ9UIQ6 1025 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 RPS6KA6Q9UK32 745 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 DNAJC12Q9UKB3 198 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 RARRES3Q9UL19 164 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 EXOC7Q9UPT5 735 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 MAGED1Q9Y5V3 778 aaPredicted RBP3.38□□□□□ -1.87
TRIM4-205ENST00000496896 ALG6Q9Y672 507 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 USH1CQ9Y6N9 552 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 LY75O60449 1722 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 NFASCO94856 1347 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 MROH7Q68CQ1 1323 aa3.38□□□□□ -1.87
TRIM4-205ENST00000496896 TAF1LQ8IZX4 1826 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 COL4A1P02462 1669 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 FAM47DPA6NHR8 397 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 ACOD1A6NK06 481 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 E9PMD0 336 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 K7EQD1 137 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 PSTPIP1O43586 416 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 SPOPO43791 374 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 DKC1O60832 514 aaKnown RBP eCLIP3.37□□□□□ -1.87
TRIM4-205ENST00000496896 LYPLA2O95372 231 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 ANP32DO95626 131 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 IL1BP01584 269 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 GOLGA8HP0CJ92 632 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 ITIH1P19827 911 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 PDHA2P29803 388 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 LIMK2P53671 638 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 PLTPP55058 493 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 MFAP3P55082 362 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 NCALDP61601 193 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 PRPF4BQ13523 1007 aaKnown RBP3.37□□□□□ -1.87
TRIM4-205ENST00000496896 TRA2AQ13595 282 aaKnown RBP eCLIP3.37□□□□□ -1.87
TRIM4-205ENST00000496896 QRICH1Q2TAL8 776 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 LRRC38Q5VT99 294 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 FAM91A1Q658Y4 838 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 C3P1Q6ZMU1 363 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 TMEM179Q6ZVK1 233 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 C1orf186Q6ZWK4 172 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 ASRGL1Q7L266 308 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 CHMP1BQ7LBR1 199 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 ZNF720Q7Z2F6 126 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 PCGF5Q86SE9 256 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 SLC47A2Q86VL8 602 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 FAM228AQ86W67 206 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 MARCH9Q86YJ5 346 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 SLC13A5Q86YT5 568 aaPredicted RBP3.37□□□□□ -1.87
TRIM4-205ENST00000496896 NELFCDQ8IXH7 590 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 FAM71AQ8IYT1 594 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 LRRC34Q8IZ02 419 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 GPC2Q8N158 579 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 ARHGAP18Q8N392 663 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.37□□□□□ -1.87
TRIM4-205ENST00000496896 PRELID2Q8N945 189 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 OR4D10Q8NGI6 311 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 OR10G7Q8NGN6 311 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 FBXO25Q8TCJ0 367 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 SHC3Q92529 594 aa3.37□□□□□ -1.87
TRIM4-205ENST00000496896 TBC1D31Q96DN5 1066 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms