RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 PANX1Q96RD7 426 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 C3orf14Q9HBI5 128 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.28■□□□□ 0.84
C9orf3-222ENST00000496567 ZNF639Q9UID6 485 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 LEF1Q9UJU2 399 aaPredicted RBP20.28■□□□□ 0.84
C9orf3-222ENST00000496567 MAN2B2Q9Y2E5 1009 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 K7ENP7 123 aa20.27■□□□□ 0.84
C9orf3-222ENST00000496567 CPSF4O95639 269 aaKnown RBP20.27■□□□□ 0.84
C9orf3-222ENST00000496567 ABCB1P08183 1280 aaPredicted RBP20.27■□□□□ 0.84
C9orf3-222ENST00000496567 ITPKBP27987 946 aa20.27■□□□□ 0.84
C9orf3-222ENST00000496567 MRPS35P82673 323 aaKnown RBP20.27■□□□□ 0.84
C9orf3-222ENST00000496567 TRMT12Q53H54 448 aaKnown RBP20.27■□□□□ 0.84
C9orf3-222ENST00000496567 DCAF10Q5QP82 559 aa20.27■□□□□ 0.84
C9orf3-222ENST00000496567 INO80CQ6PI98 192 aaPredicted RBP20.27■□□□□ 0.84
C9orf3-222ENST00000496567 GOT1L1Q8NHS2 421 aaPredicted RBP20.27■□□□□ 0.84
C9orf3-222ENST00000496567 DOK4Q8TEW6 326 aa20.27■□□□□ 0.84
C9orf3-222ENST00000496567 ZNF721Q8TF20 911 aa20.27■□□□□ 0.84
C9orf3-222ENST00000496567 NCLNQ969V3 563 aa20.27■□□□□ 0.84
C9orf3-222ENST00000496567 VMP1Q96GC9 406 aa20.27■□□□□ 0.84
C9orf3-222ENST00000496567 ATP13A2Q9NQ11 1180 aa20.27■□□□□ 0.84
C9orf3-222ENST00000496567 IGF2RP11717 2491 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 BBIP1A8MTZ0 92 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 RFXANKO14593 260 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 IGKV3-11P04433 115 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 CD1EP15812 388 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 S1PR1P21453 382 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 MC3RP41968 323 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 CDK9P50750 372 aaKnown RBP20.26■□□□□ 0.83
C9orf3-222ENST00000496567 GPR143P51810 404 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 VAC14Q08AM6 782 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 AIMP2Q13155 320 aaKnown RBP20.26■□□□□ 0.83
C9orf3-222ENST00000496567 STX5Q13190 355 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 TLR1Q15399 786 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 C6orf10Q5SRN2 563 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 FAM91A1Q658Y4 838 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 SNX32Q86XE0 403 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 TRIML2Q8N7C3 387 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 CLEC1AQ8NC01 280 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 OR7G2Q8NG99 324 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 GTF2H4Q92759 462 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 CMTM5Q96DZ9 223 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 SEMA4CQ9C0C4 833 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 MMP25Q9NPA2 562 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 SIRT3Q9NTG7 399 aaPredicted RBP20.26■□□□□ 0.83
C9orf3-222ENST00000496567 DDX18Q9NVP1 670 aaKnown RBP20.26■□□□□ 0.83
C9orf3-222ENST00000496567 SNX8Q9Y5X2 465 aa20.26■□□□□ 0.83
C9orf3-222ENST00000496567 LOC100653049A0A140TA62 436 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 CAPN14A8MX76 684 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 HRKO00198 91 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 KRT34O76011 436 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 PRDX6P30041 224 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 SOX18P35713 384 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 TRPC1P48995 793 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 CLCN2P51788 898 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 PRR5P85299 388 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 MMEL1Q495T6 779 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 SLC2A7Q6PXP3 512 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 TMEM64Q6YI46 380 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 RNF111Q6ZNA4 994 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 TREML1Q86YW5 311 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 KBTBD2Q8IY47 623 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 OR2L13Q8N349 312 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 APCDD1LQ8NCL9 501 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 DNAJB8Q8NHS0 232 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 MOAP1Q96BY2 351 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 OR10A5Q9H207 317 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 CXorf36Q9H7Y0 433 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 SERHLQ9NQF3 203 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 BCAP29Q9UHQ4 241 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 C19orf53Q9UNZ5 99 aaPredicted RBP20.25■□□□□ 0.83
C9orf3-222ENST00000496567 CFL2Q9Y281 166 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 ASPDHA6ND91 283 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 ARGFXA6NJG6 315 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 EMC8O43402 210 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 PRAMEF2O60811 474 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 COQ9O75208 318 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 ANP32DO95626 131 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 SERPINA7P05543 415 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 COX4I1P13073 169 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 SSTR4P31391 388 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 DEFB109BQ30KR1 87 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 SPDYE7PQ495Y7 208 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 COQ5Q5HYK3 327 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 FHL5Q5TD97 284 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 BHLHB9Q6PI77 547 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 FITM2Q8N6M3 262 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 SFXN5Q8TD22 340 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 ELP5Q8TE02 316 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 MAGED4Q96JG8 741 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 INPP5KQ9BT40 448 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 NUDT9Q9BW91 350 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 CPNE5Q9HCH3 593 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 NTMQ9P121 344 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 VPS4AQ9UN37 437 aa20.25■□□□□ 0.83
C9orf3-222ENST00000496567 CHD8Q9HCK8 2581 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 PCSK5Q92824 1860 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 OR6C76A6NM76 312 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 UPK1AO00322 258 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 CBX7O95931 251 aa20.24■□□□□ 0.83
C9orf3-222ENST00000496567 UQCRC2P22695 453 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms