RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 SONP18583 2426 aaKnown RBP4.02□□□□□ -1.77
VPS52-222ENST00000495981 LOC102723996A0A087X1L8 192 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 LOC285095A0A1B0GVY8 99 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PIPSLA2A3N6 862 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 LRRD1A4D1F6 860 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 TRIM64A6NGJ6 449 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 TRIM64BA6NI03 449 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 OR2AG2A6NM03 316 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 LINC00473A8K010 186 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 SMTNL1A8MU46 457 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 KCNAB3O43448 404 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 HCRTR1O43613 425 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PEX1O43933 1283 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 CNOT3O75175 753 aaKnown RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 WISP2O76076 250 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 TPPPO94811 219 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 CDK14O94921 469 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 ZBTB11O95625 1053 aaPredicted RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 TFP02787 698 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 MT-ND3P03897 115 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 ENO1P06733 434 aaKnown RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 RAB40ALP0C0E4 278 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 COX6B1P14854 86 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 AMD1P17707 334 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 HLA-DPA1P20036 260 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 ITGAXP20702 1163 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PTPN3P26045 913 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PBLDP30039 288 aaPredicted RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 RYKP34925 604 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 HMGCLP35914 325 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 SPAM1P38567 509 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 BUD31P41223 144 aaPredicted RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 GABRA4P48169 554 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 ARCN1P48444 511 aaKnown RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 PRLHRP49683 370 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 ZNF140P52738 457 aaPredicted RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 IST1P53990 364 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PNLIPRP2P54317 469 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 EEFSECP57772 596 aaKnown RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 ACY1Q03154 408 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 CAMK2DQ13557 499 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 RAPSNQ13702 412 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 SNTB1Q13884 538 aaKnown RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 KPNB1Q14974 876 aaKnown RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 LARS2Q15031 903 aaKnown RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 PDK2Q15119 407 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 CCDC92Q53HC0 331 aaPredicted RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 SIRPB2Q5JXA9 342 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 SPDYAQ5MJ70 313 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 DCAF10Q5QP82 559 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 CYB5D1Q6P9G0 228 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 RANBP10Q6VN20 620 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 DCDC5Q6ZRR9 648 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PEG10Q86TG7 708 aaKnown RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 OOSP2Q86WS3 158 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 TDRPQ86YL5 185 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 KLBQ86Z14 1044 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 NDUFAF2Q8N183 169 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 ZBTB2Q8N680 514 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 OR4N2Q8NGD1 307 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 OR8K5Q8NH50 307 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 OR1L3Q8NH93 324 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 FLVCR1-AS1Q8TAF5 88 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PNPLA2Q96AD5 504 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 CXorf40BQ96DE9 158 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 AGAP3Q96P47 875 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 QKIQ96PU8 341 aaKnown RBP eCLIP4.01□□□□□ -1.77
VPS52-222ENST00000495981 WWP1Q9H0M0 922 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 SLC25A51Q9H1U9 297 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 ZBTB20Q9HC78 741 aaPredicted RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 BPIFA1Q9NP55 256 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 IMP3Q9NV31 184 aaKnown RBP4.01□□□□□ -1.77
VPS52-222ENST00000495981 GPR83Q9NYM4 423 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 IL17CQ9P0M4 197 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 UVRAGQ9P2Y5 699 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 DNAJB9Q9UBS3 223 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 TRIM10Q9UDY6 481 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PRDM4Q9UKN5 801 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PSMD13Q9UNM6 376 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 CSAG2Q9Y5P2 127 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 SPTBP11277 2137 aa4.01□□□□□ -1.77
VPS52-222ENST00000495981 PIKFYVEQ9Y2I7 2098 aa4□□□□□ -1.77
VPS52-222ENST00000495981 IGLV3-16A0A075B6K0 115 aa4□□□□□ -1.77
VPS52-222ENST00000495981 GLYATL1P3A0A0U1RQE8 302 aa4□□□□□ -1.77
VPS52-222ENST00000495981 A6NL46 340 aa4□□□□□ -1.77
VPS52-222ENST00000495981 SPRY1O43609 319 aaPredicted RBP4□□□□□ -1.77
VPS52-222ENST00000495981 BUD23O43709 281 aaKnown RBP4□□□□□ -1.77
VPS52-222ENST00000495981 MITFO75030 526 aaPredicted RBP4□□□□□ -1.77
VPS52-222ENST00000495981 KLF7O75840 302 aaPredicted RBP4□□□□□ -1.77
VPS52-222ENST00000495981 NKX2-2O95096 273 aa4□□□□□ -1.77
VPS52-222ENST00000495981 GOSR1O95249 250 aa4□□□□□ -1.77
VPS52-222ENST00000495981 LCA5LO95447 670 aa4□□□□□ -1.77
VPS52-222ENST00000495981 SERPING1P05155 500 aa4□□□□□ -1.77
VPS52-222ENST00000495981 UMODP07911 640 aa4□□□□□ -1.77
VPS52-222ENST00000495981 HOXB5P09067 269 aa4□□□□□ -1.77
VPS52-222ENST00000495981 SLC35G4P0C7Q5 338 aa4□□□□□ -1.77
VPS52-222ENST00000495981 PVRP15151 417 aa4□□□□□ -1.77
VPS52-222ENST00000495981 ATP6V1B1P15313 513 aa4□□□□□ -1.77
VPS52-222ENST00000495981 ST6GAL1P15907 406 aa4□□□□□ -1.77
VPS52-222ENST00000495981 IL7RP16871 459 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms