RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PRRC2AP48634 2157 aaKnown RBP10.69□□□□□ -0.7
VTI1A-208ENST00000494728 IQANK1A0A1B0GTG1 560 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 C2orf92A0A1B0GVN3 265 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 OR6C76A6NM76 312 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 FIGNL2A6NMB9 653 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 BCKDKO14874 412 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 DYRK3O43781 588 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 SUSD5O60279 629 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 SMIM24O75264 130 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 NME6O75414 186 aaPredicted RBP10.68□□□□□ -0.7
VTI1A-208ENST00000494728 OR4F21O95013 312 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 CPMP14384 443 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 CHN1P15882 459 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 GPX3P22352 226 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 GALNSP34059 522 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 HTR6P50406 440 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 SERPINB9P50453 376 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 XKP51811 444 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 DLX5P56178 289 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 EXOSC7Q15024 291 aaKnown RBP10.68□□□□□ -0.7
VTI1A-208ENST00000494728 RPS6KA2Q15349 733 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 LTB4RQ15722 352 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 TSNAXIP1Q2TAA8 658 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 DCST1Q5T197 706 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 C1orf185Q5T7R7 199 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 TMEM211Q6ICI0 200 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 PAOXQ6QHF9 649 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 FAM111BQ6SJ93 734 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 B3GNT6Q6ZMB0 384 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 DMRTC2Q8IXT2 367 aaPredicted RBP10.68□□□□□ -0.7
VTI1A-208ENST00000494728 SLC15A4Q8N697 577 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 NAXEQ8NCW5 288 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 NTNG2Q96CW9 530 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 JSRP1Q96MG2 331 aaPredicted RBP10.68□□□□□ -0.7
VTI1A-208ENST00000494728 RILPQ96NA2 401 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 TMEM237Q96Q45 408 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 MRPL57Q9BQC6 102 aaKnown RBP10.68□□□□□ -0.7
VTI1A-208ENST00000494728 DOHHQ9BU89 302 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 C1QTNF3Q9BXJ4 246 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 NXF5Q9H1B4 397 aaKnown RBP10.68□□□□□ -0.7
VTI1A-208ENST00000494728 OR10A5Q9H207 317 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 MRPL46Q9H2W6 279 aaKnown RBP10.68□□□□□ -0.7
VTI1A-208ENST00000494728 UBQLN3Q9H347 655 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 LDAHQ9H6V9 325 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 MCCC2Q9HCC0 563 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.68□□□□□ -0.79e-7■■■■□ 22.5
VTI1A-208ENST00000494728 MAT2BQ9NZL9 334 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 TMEM216Q9P0N5 145 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 HEY2Q9UBP5 337 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 NFU1Q9UMS0 254 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 SLC12A4Q9UP95 1085 aa10.68□□□□□ -0.7
VTI1A-208ENST00000494728 KRT38O76015 456 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 NT5EP21589 574 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 PIK3R1P27986 724 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ABCD3P28288 659 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 FEN1P39748 380 aaKnown RBP10.67□□□□□ -0.7
VTI1A-208ENST00000494728 IFT88Q13099 833 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 BIKQ13323 160 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 SNTB1Q13884 538 aaKnown RBP10.67□□□□□ -0.7
VTI1A-208ENST00000494728 SLC10A1Q14973 349 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 TESK1Q15569 626 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 PRICKLE4Q2TBC4 344 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 UNC50Q53HI1 259 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 CCNYL2Q5T2Q4 361 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 TTC19Q6DKK2 380 aaPredicted RBP10.67□□□□□ -0.7
VTI1A-208ENST00000494728 SLC48A1Q6P1K1 146 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ACAD11Q709F0 780 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 MILR1Q7Z6M3 343 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 CDH24Q86UP0 819 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 GSPT2Q8IYD1 628 aaKnown RBP10.67□□□□□ -0.7
VTI1A-208ENST00000494728 C1orf52Q8N6N3 182 aaKnown RBP10.67□□□□□ -0.7
VTI1A-208ENST00000494728 RELL2Q8NC24 303 aaPredicted RBP10.67□□□□□ -0.7
VTI1A-208ENST00000494728 LRRN4CLQ8ND94 238 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ADCY4Q8NFM4 1077 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 OR4K14Q8NGD5 310 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 SPPL2AQ8TCT8 520 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 TRPC4APQ8TEL6 797 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 CHTF18Q8WVB6 975 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 NRGNQ92686 78 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 DIO2Q92813 273 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 TM4SF18Q96CE8 201 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ZNF597Q96LX8 424 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 KCNA7Q96RP8 456 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ITPAQ9BY32 194 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 EPB41L4BQ9H329 900 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ELOVL6Q9H5J4 265 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ANKRA2Q9H9E1 313 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 WDR41Q9HAD4 459 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 KCNJ16Q9NPI9 418 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 EHD3Q9NZN3 535 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 CNIH4Q9P003 139 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ADAM29Q9UKF5 820 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ITGB1BP2Q9UKP3 347 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 ACAD8Q9UKU7 415 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 BOKQ9UMX3 212 aaPredicted RBP10.67□□□□□ -0.7
VTI1A-208ENST00000494728 PCDHA9Q9Y5H5 950 aa10.67□□□□□ -0.7
VTI1A-208ENST00000494728 A0A087WUV0 522 aaPredicted RBP10.66□□□□□ -0.7
VTI1A-208ENST00000494728 EXOC1LA0A1B0GW35 172 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 FOXO6A8MYZ6 492 aa10.66□□□□□ -0.7
VTI1A-208ENST00000494728 B4DXG7 233 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms