RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 NT5EP21589 574 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 DNASE1P24855 282 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 PTX3P26022 381 aaPredicted RBP11.57□□□□□ -0.56
SKA1-205ENST00000494518 MAGEA4P43358 317 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 CDK9P50750 372 aaKnown RBP11.57□□□□□ -0.56
SKA1-205ENST00000494518 DGKQP52824 942 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 TBL3Q12788 808 aaKnown RBP11.57□□□□□ -0.56
SKA1-205ENST00000494518 BIKQ13323 160 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 WIPI1Q5MNZ9 446 aaPredicted RBP11.57□□□□□ -0.56
SKA1-205ENST00000494518 FNDC7Q5VTL7 733 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 LIPJQ5W064 366 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 NUDT13Q86X67 352 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 DND1Q8IYX4 353 aaKnown RBP11.57□□□□□ -0.56
SKA1-205ENST00000494518 ZNF441Q8N8Z8 693 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 LINC01560Q8TB33 94 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 FBXO25Q8TCJ0 367 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 SPPL2AQ8TCT8 520 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 RNASE6Q93091 150 aaKnown RBP11.57□□□□□ -0.56
SKA1-205ENST00000494518 DDX31Q9H8H2 851 aaKnown RBP11.57□□□□□ -0.56
SKA1-205ENST00000494518 IPPKQ9H8X2 491 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 WDR41Q9HAD4 459 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 CXorf21Q9HAI6 301 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 GRPEL1Q9HAV7 217 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 SNX15Q9NRS6 342 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 QPCTLQ9NXS2 382 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 DTX4Q9Y2E6 619 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 ACOT9Q9Y305 439 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 PCDHGA11Q9Y5H2 935 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 NPFFR2Q9Y5X5 522 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 NSD1Q96L73 2696 aaPredicted RBP11.56□□□□□ -0.56
SKA1-205ENST00000494518 EEF1E1-BLOC1S5C9J1V9 151 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 H0YIV9 168 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 EEF1E1O43324 174 aaKnown RBP11.56□□□□□ -0.56
SKA1-205ENST00000494518 EPPINO95925 133 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 C2P06681 752 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 GSTA2P09210 222 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 SLC35E2P0CK97 266 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 PIK3R1P27986 724 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 CEACAM8P31997 349 aaPredicted RBP11.56□□□□□ -0.56
SKA1-205ENST00000494518 STX2P32856 288 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 PCDH1Q08174 1060 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 POU4F3Q15319 338 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 UBAP2Q5T6F2 1119 aaKnown RBP11.56□□□□□ -0.56
SKA1-205ENST00000494518 OR52E8Q6IFG1 317 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 POMZP3Q6PJE2 187 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 PLXDC2Q6UX71 529 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 CYS1Q717R9 158 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 MAATS1Q7Z4T9 603 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 YRDCQ86U90 279 aaKnown RBP11.56□□□□□ -0.56
SKA1-205ENST00000494518 LACC1Q8IV20 430 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 GALNT12Q8IXK2 581 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 MMP21Q8N119 569 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 C7orf57Q8NEG2 295 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 SPATA4Q8NEY3 305 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 WDR20Q8TBZ3 569 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 REPS1Q96D71 796 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 UGT2B28Q9BY64 529 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 OR10A5Q9H207 317 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 EHD3Q9NZN3 535 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 MTRF1LQ9UGC7 380 aaKnown RBP11.56□□□□□ -0.56
SKA1-205ENST00000494518 C15orf41Q9Y2V0 281 aa11.56□□□□□ -0.56
SKA1-205ENST00000494518 PCNX3Q9H6A9 2034 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 A0A087X1B8 175 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 A0A096LPK6 155 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 HMX2A2RU54 273 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 CAPN14A8MX76 684 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 AHRRA9YTQ3 701 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 IL2RAP01589 272 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 HPNP05981 417 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 KLK1P06870 262 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 HOXB4P17483 251 aaPredicted RBP11.55□□□□□ -0.56
SKA1-205ENST00000494518 BMP7P18075 431 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 KRT15P19012 456 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 SOX18P35713 384 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 CASP3P42574 277 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 XKP51811 444 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 ALDH18A1P54886 795 aaKnown RBP11.55□□□□□ -0.56
SKA1-205ENST00000494518 CUL3Q13618 768 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 EXOSC7Q15024 291 aaKnown RBP11.55□□□□□ -0.56
SKA1-205ENST00000494518 FAM83EQ2M2I3 478 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 SGO1Q5FBB7 561 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 TBCELQ5QJ74 424 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 C6orf163Q5TEZ5 329 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 FAM111BQ6SJ93 734 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 ZDHHC24Q6UX98 284 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 ANGPTL8Q6UXH0 198 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 PACS2Q86VP3 889 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 PLD6Q8N2A8 252 aaKnown RBP11.55□□□□□ -0.56
SKA1-205ENST00000494518 ZNF615Q8N8J6 731 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 PTGR2Q8N8N7 351 aaPredicted RBP11.55□□□□□ -0.56
SKA1-205ENST00000494518 OR52B6Q8NGF0 335 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 RHEBL1Q8TAI7 183 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 FAM222BQ8WU58 562 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 ATP6V1E2Q96A05 226 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 ADIPOR1Q96A54 375 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 HSPBAP1Q96EW2 488 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 LRRC46Q96FV0 321 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 ANGPTL4Q9BY76 406 aa11.55□□□□□ -0.56
SKA1-205ENST00000494518 MRPL1Q9BYD6 325 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms