RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 KRTAP10-9P60411 292 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 GALNT1Q10472 559 aaPredicted RBP12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 DUSP8Q13202 625 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 SF3B4Q15427 424 aaKnown RBP eCLIP12.32□□□□□ -0.449e-8■■□□□ 12.6
CTDSP1-212ENST00000494067 GLE1Q53GS7 698 aaKnown RBP12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 TEX35Q5T0J7 233 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 CES4AQ5XG92 561 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 CCDC71Q8IV32 467 aaPredicted RBP12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 CTAGE4Q8IX94 777 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 TRPC4APQ8TEL6 797 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 DIO2Q92813 273 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 LRRC46Q96FV0 321 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 ZNF597Q96LX8 424 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 HBEGFQ99075 208 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 MRPL57Q9BQC6 102 aaKnown RBP12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 UCK2Q9BZX2 261 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 MRPL46Q9H2W6 279 aaKnown RBP12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 MCCC2Q9HCC0 563 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 PSME2Q9UL46 239 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 NFU1Q9UMS0 254 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 SLC12A4Q9UP95 1085 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 CFL2Q9Y281 166 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 DTX4Q9Y2E6 619 aa12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 CHCHD2Q9Y6H1 151 aaPredicted RBP12.32□□□□□ -0.44
CTDSP1-212ENST00000494067 KIAA1549Q9HCM3 1950 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 C1orf226A1L170 272 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 CDH16O75309 829 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 SNX4O95219 450 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 PDYNP01213 254 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 CHN1P15882 459 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 TAC1P20366 129 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 S1PR1P21453 382 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 GDF1P27539 372 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 MASP1P48740 699 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 XKP51811 444 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 NTRK2Q16620 822 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 GGTA1PQ4G0N0 100 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 SGO1Q5FBB7 561 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 C1orf185Q5T7R7 199 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 BICRALQ6AI39 1079 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 RTL6Q6ICC9 239 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 FAM180BQ6P0A1 224 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 PACS2Q86VP3 889 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 GSPT2Q8IYD1 628 aaKnown RBP12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 OR7G1Q8NGA0 311 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 OR10G3Q8NGC4 313 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 MZB1Q8WU39 189 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 SELENOMQ8WWX9 145 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 ZNF559Q9BR84 538 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 FAIM2Q9BWQ8 316 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 TXLNGYQ9BZA5 131 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 OR10A5Q9H207 317 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 CXorf21Q9HAI6 301 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 ACKR4Q9NPB9 350 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 TMEM216Q9P0N5 145 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 SPRR3Q9UBC9 169 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 CES1P1Q9UKY3 287 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 CNOT11Q9UKZ1 510 aaKnown RBP12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 PCDHGB3Q9Y5G1 929 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 FAM215AQ9Y5M1 114 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 NPFFR2Q9Y5X5 522 aa12.31□□□□□ -0.44
CTDSP1-212ENST00000494067 ANKRD33BA6NCL7 494 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 KDM4EB2RXH2 506 aaPredicted RBP12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 TRAPPC6AO75865 159 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 TOXO94900 526 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 OR4F21O95013 312 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 SNRPAP09012 282 aaKnown RBP12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 GLI4P10075 376 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 CPMP14384 443 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 PORP16435 677 aaPredicted RBP12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 MSX1P28360 303 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 TFF3Q07654 80 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 MGAT2Q10469 447 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 RPS6KA2Q15349 733 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 TOMM20Q15388 145 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 UNC50Q53HI1 259 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 DESI1Q6ICB0 168 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 COMMD6Q7Z4G1 85 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 CNPY4Q8N129 248 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 LRRC25Q8N386 305 aaPredicted RBP12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 METTL4Q8N3J2 472 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 ZNF615Q8N8J6 731 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 NEIL3Q8TAT5 605 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 TMEM237Q96Q45 408 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 SECISBP2Q96T21 854 aaKnown RBP12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 TREX2Q9BQ50 279 aaPredicted RBP12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 C1QTNF3Q9BXJ4 246 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 BRINP2Q9C0B6 783 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 ZNF703Q9H7S9 590 aaPredicted RBP12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 BRF2Q9HAW0 419 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 ZNF780BQ9Y6R6 833 aa12.3□□□□□ -0.44
CTDSP1-212ENST00000494067 DNAJC13O75165 2243 aa12.29□□□□□ -0.44
CTDSP1-212ENST00000494067 C15orf38-AP3S2A0A0A6YYH1 394 aa12.29□□□□□ -0.44
CTDSP1-212ENST00000494067 EXOC1LA0A1B0GW35 172 aa12.29□□□□□ -0.44
CTDSP1-212ENST00000494067 HSPB2A8KAH6 182 aa12.29□□□□□ -0.44
CTDSP1-212ENST00000494067 AHRRA9YTQ3 701 aa12.29□□□□□ -0.44
CTDSP1-212ENST00000494067 RIPK2O43353 540 aa12.29□□□□□ -0.44
CTDSP1-212ENST00000494067 DLX3O60479 287 aa12.29□□□□□ -0.44
CTDSP1-212ENST00000494067 ERAL1O75616 437 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms