RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SOX18P35713 384 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 CRISP3P54108 245 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 RACK1P63244 317 aaKnown RBP10.01□□□□□ -0.81
CLCN6-208ENST00000494028 IL5RAQ01344 420 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 ZP2Q05996 745 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 TOP3AQ13472 1001 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-208ENST00000494028 GANABQ14697 944 aaKnown RBP10.01□□□□□ -0.81
CLCN6-208ENST00000494028 MAD2L1BPQ15013 274 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-208ENST00000494028 BROXQ5VW32 411 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 PRAMEF8Q5VWM4 474 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 PRAMEF7Q5VXH5 474 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 MFSD12Q6NUT3 480 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 BHLHB9Q6PI77 547 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF438Q7Z4V0 828 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 B3GNT8Q7Z7M8 397 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 C17orf82Q86X59 251 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-208ENST00000494028 LACC1Q8IV20 430 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 SHISA5Q8N114 240 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 CA13Q8N1Q1 262 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 SPEM1Q8N4L4 309 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 SLC5A8Q8N695 610 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF655Q8N720 491 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-208ENST00000494028 AVL9Q8NBF6 648 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 TMEM52Q8NDY8 209 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 OR7G2Q8NG99 324 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 LMX1AQ8TE12 382 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 PROX1Q92786 737 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 KAT2AQ92830 837 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 SHDQ96IW2 340 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF354BQ96LW1 612 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 HSPA12BQ96MM6 686 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF607Q96SK3 696 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 BTBD2Q9BX70 525 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 ANKRA2Q9H9E1 313 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 POLR1BQ9H9Y6 1135 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 FAM60AQ9NP50 221 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 EQTNQ9NQ60 294 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 RLIMQ9NVW2 624 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 PAK1IP1Q9NWT1 392 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-208ENST00000494028 NTMQ9P121 344 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 SEC14L3Q9UDX4 400 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 ACAD8Q9UKU7 415 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 POFUT2Q9Y2G5 429 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 SH3GLB1Q9Y371 365 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 GMPPBQ9Y5P6 360 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 KCNE3Q9Y6H6 103 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 HSPE1-MOB4S4R3N1 261 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 UNC80Q8N2C7 3258 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 NINQ8N4C6 2090 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 TRBV4-1A0A0J9YWV2 114 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 FAM227AF5H4B4 570 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 K7ESF4 209 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 AHCYL1O43865 530 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 FGF17O60258 216 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 ABCB7O75027 752 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 RDH16O75452 317 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 CCNB2O95067 398 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 GADD45GO95257 159 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 ZIC2O95409 532 aaPredicted RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 ANGPTL1O95841 491 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 EIF2S1P05198 315 aaKnown RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 PROS1P07225 676 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 CTSBP07858 339 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 IFI6P09912 130 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 CCDC159P0C7I6 412 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 ACP2P11117 423 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 ANXA8P13928 327 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 CPMP14384 443 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 JUNBP17275 347 aaPredicted RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 CDH3P22223 829 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 ELAVL4P26378 380 aaKnown RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 MAOBP27338 520 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 GSTT1P30711 240 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 MPIP34949 423 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 KRT20P35900 424 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 PEX19P40855 299 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 PRKAG1P54619 331 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 RAB38P57729 211 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 VSX2P58304 361 aaPredicted RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 RPL6Q02878 288 aaKnown RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 CDK5R2Q13319 367 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 COL9A2Q14055 689 aaPredicted RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 SIM2Q14190 667 aaPredicted RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 RAB39AQ14964 217 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 ELOCQ15369 112 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 MICAQ29983 383 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 PRTGQ2VWP7 1150 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF628Q5EBL2 1059 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 EXOSC6Q5RKV6 272 aaKnown RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 FHL5Q5TD97 284 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF770Q6IQ21 691 aaPredicted RBP10□□□□□ -0.81
CLCN6-208ENST00000494028 ARMC6Q6NXE6 501 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 CDC73Q6P1J9 531 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 DEF8Q6ZN54 512 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 KCTD8Q6ZWB6 473 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 USP53Q70EK8 1073 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 GPR141Q7Z602 305 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 GKN2Q86XP6 184 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 KRT73Q86Y46 540 aa10□□□□□ -0.81
CLCN6-208ENST00000494028 TMEFF1Q8IYR6 380 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms