RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 ZNF267Q14586 743 aaPredicted RBP12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 TBCCQ15814 346 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 TTC27Q6P3X3 843 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 TMEM64Q6YI46 380 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 YRDCQ86U90 279 aaKnown RBP12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 C17orf47Q8NEP4 570 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 ZNF473Q8WTR7 871 aaKnown RBP12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 RIT1Q92963 219 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 KRT12Q99456 494 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 TMEM79Q9BSE2 394 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 ELOVL5Q9NYP7 299 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 SLC17A6Q9P2U8 582 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 CTNNAL1Q9UBT7 734 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 PHF11Q9UIL8 331 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 RNF112Q9ULX5 631 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 GUCA1BQ9UMX6 200 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 DLGAP4Q9Y2H0 992 aa12.93□□□□□ -0.34
PRPF40A-211ENST00000493468 LRRC14BA6NHZ5 514 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 GNB5O14775 395 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 SNPHO15079 494 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 OR10H2O60403 315 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 GPR75O95800 540 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 TLX1P31314 330 aaPredicted RBP12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 CASP2P42575 452 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 ZNF75DP51815 510 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 GFRA1P56159 465 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 FUT7Q11130 342 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 SETDB1Q15047 1291 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 TGFBIQ15582 683 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 TSNQ15631 228 aaKnown RBP12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 ETFDHQ16134 617 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 HIST2H2ACQ16777 129 aaPredicted RBP12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 CDKL4Q5MAI5 379 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 HIST2H2AA3Q6FI13 130 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 OR2A2Q6IF42 318 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 ANGPTL8Q6UXH0 198 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 GPR180Q86V85 440 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 GRAMD2AQ8IUY3 354 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 PPIL6Q8IXY8 311 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 ZCCHC7Q8N3Z6 543 aaKnown RBP12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 UBE2E3Q969T4 207 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 STARD4Q96DR4 205 aa12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 PTBP2Q9UKA9 531 aaKnown RBP12.92□□□□□ -0.34
PRPF40A-211ENST00000493468 TAPBPO15533 448 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 NID1P14543 1247 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 NAGAP17050 411 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 BUD31P41223 144 aaPredicted RBP12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 LHX2P50458 406 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 ARFIP1P53367 373 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 ATP5J2P56134 94 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 SLAMF1Q13291 335 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 SNTA1Q13424 505 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 PDK4Q16654 411 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 KHDRBS2Q5VWX1 349 aaKnown RBP12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 HLA-DQA1Q5Y7H0 255 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 C18orf63Q68DL7 685 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 OR4C11Q6IEV9 310 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 SLC30A6Q6NXT4 461 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 ZNF474Q6S9Z5 364 aaPredicted RBP12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 MILR1Q7Z6M3 343 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 LAS2Q8IYD9 372 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 ADIPOR1Q96A54 375 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 CMTM7Q96FZ5 175 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 FAM111AQ96PZ2 611 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 PIGQQ9BRB3 760 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 SLC39A3Q9BRY0 314 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 METTL7AQ9H8H3 244 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 ACTR8Q9H981 624 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 WIF1Q9Y5W5 379 aa12.91□□□□□ -0.34
PRPF40A-211ENST00000493468 C16orf97H3BN30 126 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 PLOD2O00469 737 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 CD5LO43866 347 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 STK16O75716 305 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 CBR3O75828 277 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 SMNDC1O75940 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 TP53P04637 393 aaPredicted RBP12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 ABCB1P08183 1280 aaPredicted RBP12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 SLC35E2BP0CK96 405 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 SLC35E2P0CK97 266 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 POU2F1P14859 743 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 ZNF708P17019 499 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 ABCD3P28288 659 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 SSTR4P31391 388 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 HNRNPH2P55795 449 aaKnown RBP12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 RPS13P62277 151 aaKnown RBP12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 SRYQ05066 204 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 DEPDC1Q5TB30 811 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 RNASEH2BQ5TBB1 312 aaKnown RBP12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 VWA1Q6PCB0 445 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 AAGABQ6PD74 315 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 PLXDC2Q6UX71 529 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 IFNEQ86WN2 208 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 TRIM42Q8IWZ5 723 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 ZNF615Q8N8J6 731 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 SNX31Q8N9S9 440 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 OR14L1PQ8NHC6 308 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 DOK4Q8TEW6 326 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 ANKRD49Q8WVL7 239 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 DTNBP1Q96EV8 351 aa12.9□□□□□ -0.34
PRPF40A-211ENST00000493468 OSBPL11Q9BXB4 747 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms