RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 NFU1Q9UMS0 254 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 EDARQ9UNE0 448 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 PCDHA9Q9Y5H5 950 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 FAM215AQ9Y5M1 114 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 LIPGQ9Y5X9 500 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 OTOGQ6ZRI0 2925 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 PDZD2O15018 2839 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 CCDC151A5D8V7 595 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 WASHC1A8K0Z3 465 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 POC1B-GALNT4F8VUJ3 575 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 TRAPPC6AO75865 159 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 BCAS2O75934 225 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-205ENST00000492851 KRT6AP02538 564 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 GBAP04062 536 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 KRT6BP04259 564 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 RPS17P08708 135 aaKnown RBP11.44□□□□□ -0.58
COL6A1-205ENST00000492851 CELA3AP09093 270 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 CTAGE8P0CG41 777 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 HSD3B1P14060 373 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 HSD3B2P26439 372 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 GDF1P27539 372 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 SSTR4P31391 388 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 GCKP35557 465 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 KRT6CP48668 564 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 MASP1P48740 699 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 PSPHP78330 225 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 MAP4K2Q12851 820 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 TRAF3Q13114 568 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 RTL6Q6ICC9 239 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 SLC48A1Q6P1K1 146 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 NUP54Q7Z3B4 507 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 CTAGE4Q8IX94 777 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 SAMD14Q8IZD0 417 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-205ENST00000492851 RPRMLQ8N4K4 120 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 SPPL2AQ8TCT8 520 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 SELENOMQ8WWX9 145 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 ADIPOR1Q96A54 375 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 HSPBAP1Q96EW2 488 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 MRPL1Q9BYD6 325 aaKnown RBP11.44□□□□□ -0.58
COL6A1-205ENST00000492851 PROK2Q9HC23 129 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 NPDC1Q9NQX5 325 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF358Q9NW07 568 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 TEX10Q9NXF1 929 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-205ENST00000492851 TNFRSF10DQ9UBN6 386 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 PRODH2Q9UF12 536 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 TRPS1Q9UHF7 1281 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 ITGB1BP2Q9UKP3 347 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 SLC12A4Q9UP95 1085 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 STK38LQ9Y2H1 464 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF780BQ9Y6R6 833 aa11.44□□□□□ -0.58
COL6A1-205ENST00000492851 A0A0G2JNJ9 132 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 TRIM49D1C9J1S8 452 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 DVL2O14641 736 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 ACOX3O15254 700 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 EPPINO95925 133 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 CLPSP04118 112 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 ATP1B1P05026 303 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 HPNP05981 417 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 RFPL3SP0C7P2 107 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 POU3F2P20265 443 aaPredicted RBP11.43□□□□□ -0.58
COL6A1-205ENST00000492851 TIMP3P35625 211 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 DUSP8Q13202 625 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 MYBPHQ13203 477 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 SNTA1Q13424 505 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 RASA2Q15283 850 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 SGO1Q5FBB7 561 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 TMEM81Q6P7N7 255 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 TIFABQ6ZNK6 161 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 COMMD6Q7Z4G1 85 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 ULK2Q8IYT8 1036 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 VWA5B2Q8N398 1253 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF483Q8TF39 744 aaPredicted RBP11.43□□□□□ -0.58
COL6A1-205ENST00000492851 TMEM41AQ96HV5 264 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 C16orf45Q96MC5 204 aaPredicted RBP11.43□□□□□ -0.58
COL6A1-205ENST00000492851 SHCBP1LQ9BZQ2 653 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 ZBTB26Q9HCK0 441 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 SPRR3Q9UBC9 169 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 VPS29Q9UBQ0 182 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF629Q9UEG4 869 aaPredicted RBP11.43□□□□□ -0.58
COL6A1-205ENST00000492851 Q9UFV3 132 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 DMGDHQ9UI17 866 aaKnown RBP11.43□□□□□ -0.58
COL6A1-205ENST00000492851 FOXD3Q9UJU5 478 aaPredicted RBP11.43□□□□□ -0.58
COL6A1-205ENST00000492851 CES1P1Q9UKY3 287 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 FBN2P35556 2912 aa11.43□□□□□ -0.58
COL6A1-205ENST00000492851 GTF3C1Q12789 2109 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 C15orf38-AP3S2A0A0A6YYH1 394 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 EXOC1LA0A1B0GW35 172 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 LRRC3CA6NJW4 275 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 KIF2AO00139 706 aaPredicted RBP11.42□□□□□ -0.58
COL6A1-205ENST00000492851 SYT5O00445 386 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 ULK1O75385 1050 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 ZWINTO95229 277 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 PDYNP01213 254 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 IL2RAP01589 272 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 DRD2P14416 443 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 DRD5P21918 477 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 ABCD3P28288 659 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 HSD17B3P37058 310 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 CASP3P42574 277 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 CDK9P50750 372 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms