RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, human

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-215	ENST00000492417	RAB25	P57735	213 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	DCD	P81605	110 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	GNA13	Q14344	377 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ZNF750	Q32MQ0	723 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	AKIRIN2	Q53H80	203 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	C6orf52	Q5T4I8	152 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	C18orf63	Q68DL7	685 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	FCRLB	Q6BAA4	426 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	FIGNL1	Q6PIW4	674 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	WASH2P	Q6VEQ5	465 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TMEM64	Q6YI46	380 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	LINC00696	Q6ZRV3	163 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	B3GNT8	Q7Z7M8	397 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	GALNT7	Q86SF2	657 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	VASH2	Q86V25	355 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	GALNT12	Q8IXK2	581 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PARP8	Q8N3A8	854 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	LINC01555	Q8NAE3	123 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OR56A3	Q8NH54	315 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	RP9	Q8TA86	221 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SNIP1	Q8TAD8	396 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	C16orf78	Q8WTQ4	265 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	FAR1	Q8WVX9	515 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	RIT1	Q92963	219 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	LINC00615	Q96LM1	132 aa	Predicted RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OSBPL10	Q9BXB5	764 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PRRG4	Q9BZD6	226 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TBL1XR1	Q9BZK7	514 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	CHST8	Q9H2A9	424 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SP140L	Q9H930	580 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	FAM60A	Q9NP50	221 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	KLHL1	Q9NR64	748 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	THSD1	Q9NS62	852 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OCIAD1	Q9NX40	245 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	FAM53C	Q9NYF3	392 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PPIE	Q9UNP9	301 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	MAPRE3	Q9UPY8	281 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ANGPT4	Q9Y264	503 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	MDC1	Q14676	2089 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TNRC18	O15417	2968 aa	Predicted RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	IGLV3-16	A0A075B6K0	115 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417		A0A1B0GTL3	188 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417		A0A1W2PR77	199 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417		A0A1W2PRG6	482 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	C17orf105	B2RV13	164 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417		H3BNH8	94 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	CASC3	O15234	703 aa	Known RBP	4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	SCO2	O43819	266 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	FTH1P19	P0C7X4	201 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	GM2A	P17900	193 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	HIST1H1T	P22492	207 aa	Predicted RBP	4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	NR4A1	P22736	598 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	ACADL	P28330	430 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	RRM2	P31350	389 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	SLC5A2	P31639	672 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	CCKBR	P32239	447 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	GABRA3	P34903	492 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	DLST	P36957	453 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	CASR	P41180	1078 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	NRG3	P56975	720 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	EMX2	Q04743	252 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	CHAF1B	Q13112	559 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	EXOSC7	Q15024	291 aa	Known RBP	4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	NKAIN1	Q4KMZ8	207 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	TLDC1	Q6P9B6	456 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	RNF44	Q7L0R7	432 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	RAB43	Q86YS6	212 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	HPS6	Q86YV9	775 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	OR2T12	Q8NG77	320 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	DAZL	Q92904	295 aa	Known RBP	4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	TBC1D20	Q96BZ9	403 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	L3HYPDH	Q96EM0	354 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	OR4K3	Q96R72	315 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	CIB1	Q99828	191 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	REEP4	Q9H6H4	257 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	METTL7A	Q9H8H3	244 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	MS4A12	Q9NXJ0	267 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	SH3BGRL2	Q9UJC5	107 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	ZNF222	Q9UK12	451 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	ERVK-19	Q9WJR5	959 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	LRRC42	Q9Y546	428 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	PCDHGA10	Q9Y5H3	936 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	PATJ	Q8NI35	1801 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	C1orf226	A1L170	272 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417		G3V3Y1	287 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	CLIC1	O00299	241 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	WWP2	O00308	870 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	HYAL3	O43820	417 aa	Predicted RBP	4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	CDC40	O60508	579 aa	Known RBP eCLIP	4.23	□□□□□ -1.73	1e-8	■■■■■ 31.8
TRA2B-215	ENST00000492417	CPNE3	O75131	537 aa	Known RBP	4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	ALOX12B	O75342	701 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	CLEC3A	O75596	197 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	PRKD3	O94806	890 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	SERPINA1	P01009	418 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	IFNA14	P01570	189 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	ZNF806	P0C7X5	589 aa		4.23	□□□□□ -1.73
TRA2B-215	ENST00000492417	POR	P16435	677 aa	Predicted RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms