RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 ZNF358Q9NW07 568 aa18.11■□□□□ 0.49
SREBF1-216ENST00000490796 TEX10Q9NXF1 929 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-216ENST00000490796 XPR1Q9UBH6 696 aa18.11■□□□□ 0.49
SREBF1-216ENST00000490796 ADAM29Q9UKF5 820 aa18.11■□□□□ 0.49
SREBF1-216ENST00000490796 PCDHGB3Q9Y5G1 929 aa18.11■□□□□ 0.49
SREBF1-216ENST00000490796 AKAP9Q99996 3911 aa18.11■□□□□ 0.49
SREBF1-216ENST00000490796 GOLGA6L10A6NI86 522 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 SNX4O95219 450 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 CPMP14384 443 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 MAPK12P53778 367 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 FBXW4P57775 412 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 SF3B4Q15427 424 aaKnown RBP eCLIP18.1■□□□□ 0.491e-9■■■■■ 34.7
SREBF1-216ENST00000490796 OR7G1Q8NGA0 311 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 SLC44A1Q8WWI5 657 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 RILPQ96NA2 401 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 SECISBP2Q96T21 854 aaKnown RBP18.1■□□□□ 0.49
SREBF1-216ENST00000490796 MRPL1Q9BYD6 325 aaKnown RBP18.1■□□□□ 0.49
SREBF1-216ENST00000490796 PCTPQ9UKL6 214 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 SLC12A4Q9UP95 1085 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 CFL2Q9Y281 166 aa18.1■□□□□ 0.49
SREBF1-216ENST00000490796 MTORP42345 2549 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 ANKHD1Q8IWZ3 2542 aaKnown RBP18.09■□□□□ 0.49
SREBF1-216ENST00000490796 AHRRA9YTQ3 701 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 DVL2O14641 736 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 URI1O94763 535 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-216ENST00000490796 CLPSP04118 112 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 CD1EP15812 388 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 PORP16435 677 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-216ENST00000490796 FUT7Q11130 342 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 DUSP8Q13202 625 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 ARSKQ6UWY0 536 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 SPNS3Q6ZMD2 512 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 LIX1LQ8IVB5 337 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 ZNF441Q8N8Z8 693 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 SPPL2AQ8TCT8 520 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 IFT81Q8WYA0 676 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 PAFAH2Q99487 392 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 BRINP2Q9C0B6 783 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 NMRK1Q9NWW6 199 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 BCAP29Q9UHQ4 241 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 PSME2Q9UL46 239 aa18.09■□□□□ 0.49
SREBF1-216ENST00000490796 MED13LQ71F56 2210 aa18.08■□□□□ 0.49
SREBF1-216ENST00000490796 AKAP6Q13023 2319 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 A0A1W2PS29 197 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 POC1B-GALNT4F8VUJ3 575 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 CDH16O75309 829 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 TRIM3O75382 744 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-216ENST00000490796 ERAL1O75616 437 aaKnown RBP18.08■□□□□ 0.48
SREBF1-216ENST00000490796 OTCP00480 354 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 CT62P0C5K7 136 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 COL6A2P12110 1019 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 UQCRC1P31930 480 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 GCKP35557 465 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 PEX19P40855 299 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 TRAF3Q13114 568 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 TESK1Q15569 626 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 PM20D2Q8IYS1 436 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 PRR22Q8IZ63 422 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 OR4F6Q8NGB9 312 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 SELENOMQ8WWX9 145 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 NSUN5Q96P11 429 aaKnown RBP18.08■□□□□ 0.48
SREBF1-216ENST00000490796 MRPL57Q9BQC6 102 aaKnown RBP18.08■□□□□ 0.48
SREBF1-216ENST00000490796 CDC42EP4Q9H3Q1 356 aaKnown RBP18.08■□□□□ 0.48
SREBF1-216ENST00000490796 METTL7AQ9H8H3 244 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 SNX6Q9UNH7 406 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 L3MBTL1Q9Y468 752 aa18.08■□□□□ 0.48
SREBF1-216ENST00000490796 SETD2Q9BYW2 2564 aaPredicted RBP18.07■□□□□ 0.48
SREBF1-216ENST00000490796 C1orf226A1L170 272 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 CNTFP26441 200 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 KIR2DL3P43628 341 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 ART1P52961 327 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 WHAMMP3Q1A5X7 153 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 GGTA1PQ4G0N0 100 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 TEX35Q5T0J7 233 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 BICRALQ6AI39 1079 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 COMMD6Q7Z4G1 85 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 RELL1Q8IUW5 271 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 ZZZ3Q8IYH5 903 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 VWA5B2Q8N398 1253 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 METTL4Q8N3J2 472 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 ZNF615Q8N8J6 731 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 C17orf47Q8NEP4 570 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 TRPC4APQ8TEL6 797 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 FMO2Q99518 471 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 FAIM2Q9BWQ8 316 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 ANGPTL4Q9BY76 406 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 MRPL46Q9H2W6 279 aaKnown RBP18.07■□□□□ 0.48
SREBF1-216ENST00000490796 ZBTB26Q9HCK0 441 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 DNAJB12Q9NXW2 375 aaKnown RBP18.07■□□□□ 0.48
SREBF1-216ENST00000490796 CAMK2AQ9UQM7 478 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 PCDHA9Q9Y5H5 950 aa18.07■□□□□ 0.48
SREBF1-216ENST00000490796 ESRRBO95718 433 aa18.06■□□□□ 0.48
SREBF1-216ENST00000490796 IL2RAP01589 272 aa18.06■□□□□ 0.48
SREBF1-216ENST00000490796 FREM3P0C091 2139 aa18.06■□□□□ 0.48
SREBF1-216ENST00000490796 CSNK2A2P19784 350 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-216ENST00000490796 BMP5P22003 454 aa18.06■□□□□ 0.48
SREBF1-216ENST00000490796 ABCD3P28288 659 aa18.06■□□□□ 0.48
SREBF1-216ENST00000490796 FEN1P39748 380 aaKnown RBP18.06■□□□□ 0.48
SREBF1-216ENST00000490796 CASP3P42574 277 aa18.06■□□□□ 0.48
SREBF1-216ENST00000490796 CDK9P50750 372 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms