RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 KLRC4-KLRK1H3BQV0 150 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 BCAS2O75934 225 aaPredicted RBP16.05■□□□□ 0.16
MDC1-206ENST00000489540 SLC1A6P48664 564 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 GALNTL6Q49A17 601 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 ATP6AP1LQ52LC2 224 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 XKR7Q5GH72 579 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 AGBL2Q5U5Z8 902 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 CES4AQ5XG92 561 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 FAM180BQ6P0A1 224 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 FAM111BQ6SJ93 734 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 RTL4Q6ZR62 310 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 HDXQ7Z353 690 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.05■□□□□ 0.16
MDC1-206ENST00000489540 TICAM1Q8IUC6 712 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 DND1Q8IYX4 353 aaKnown RBP16.05■□□□□ 0.16
MDC1-206ENST00000489540 TAGAPQ8N103 731 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 ZNF675Q8TD23 568 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 GAL3ST4Q96RP7 486 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 ZNF639Q9UID6 485 aa16.05■□□□□ 0.16
MDC1-206ENST00000489540 LYPLA1O75608 230 aaPredicted RBP16.04■□□□□ 0.16
MDC1-206ENST00000489540 BGNP21810 368 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 MAPK1P28482 360 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 UQCRFS1P47985 274 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 WDR4P57081 412 aaKnown RBP16.04■□□□□ 0.16
MDC1-206ENST00000489540 RPL38P63173 70 aaKnown RBP16.04■□□□□ 0.16
MDC1-206ENST00000489540 DUSP2Q05923 314 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 MRPL49Q13405 166 aaKnown RBP16.04■□□□□ 0.16
MDC1-206ENST00000489540 MDGA2Q7Z553 956 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 SULF2Q8IWU5 870 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 ZNF441Q8N8Z8 693 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 GOLM1Q8NBJ4 401 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 POGLUT1Q8NBL1 392 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 C17orf47Q8NEP4 570 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 ADCY4Q8NFM4 1077 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 BBS4Q96RK4 519 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 PRODH2Q9UF12 536 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 CPAMD8Q8IZJ3 1885 aa16.04■□□□□ 0.16
MDC1-206ENST00000489540 MYO1GB0I1T2 1018 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 PEX1O43933 1283 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 ZNF354AO60765 605 aaPredicted RBP16.03■□□□□ 0.16
MDC1-206ENST00000489540 PEX11AO75192 247 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 NADKO95544 446 aaPredicted RBP16.03■□□□□ 0.16
MDC1-206ENST00000489540 SDC1P18827 310 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 TACR1P25103 407 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 ASMTP46597 345 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 RPL14P50914 215 aaKnown RBP16.03■□□□□ 0.16
MDC1-206ENST00000489540 ZNF791Q3KP31 576 aaPredicted RBP16.03■□□□□ 0.16
MDC1-206ENST00000489540 TRMT12Q53H54 448 aaKnown RBP16.03■□□□□ 0.16
MDC1-206ENST00000489540 ZNF628Q5EBL2 1059 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 FAM9CQ8IZT9 166 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 ZNF781Q8N8C0 355 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 PSD4Q8NDX1 1056 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 C16orf52Q8NHV5 167 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 ADIPOR1Q96A54 375 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 ZNF764Q96H86 408 aaPredicted RBP16.03■□□□□ 0.16
MDC1-206ENST00000489540 EGLN2Q96KS0 407 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 FRMD6Q96NE9 622 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 ZNF395Q9H8N7 513 aaPredicted RBP16.03■□□□□ 0.16
MDC1-206ENST00000489540 VIPAS39Q9H9C1 493 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 BCAP29Q9UHQ4 241 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 HAO1Q9UJM8 370 aa16.03■□□□□ 0.16
MDC1-206ENST00000489540 EXO1Q9UQ84 846 aaKnown RBP16.03■□□□□ 0.16
MDC1-206ENST00000489540 RP1L1Q8IWN7 2480 aaPredicted RBP16.03■□□□□ 0.16
MDC1-206ENST00000489540 CAPN14A8MX76 684 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 SKAP2O75563 359 aaPredicted RBP16.02■□□□□ 0.16
MDC1-206ENST00000489540 SLITRK5O94991 958 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 BCKDHAP12694 445 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 H2AFXP16104 143 aaPredicted RBP16.02■□□□□ 0.16
MDC1-206ENST00000489540 PCSK2P16519 638 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 DDX5P17844 614 aaKnown RBP16.02■□□□□ 0.16
MDC1-206ENST00000489540 SOX18P35713 384 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 NR0B1P51843 470 aaKnown RBP16.02■□□□□ 0.16
MDC1-206ENST00000489540 NRG3P56975 720 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 PMP22Q01453 160 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 ALDH6A1Q02252 535 aaKnown RBP16.02■□□□□ 0.16
MDC1-206ENST00000489540 LTB4RQ15722 352 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 EIF2S3LQ2VIR3 472 aaKnown RBP16.02■□□□□ 0.16
MDC1-206ENST00000489540 KRTCAP3Q53RY4 240 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 C6orf136Q5SQH8 315 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 TRIM42Q8IWZ5 723 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 OR9A2Q8NGT5 310 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 RAB3IL1Q8TBN0 382 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 MGARPQ8TDB4 240 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 TUBGCP3Q96CW5 907 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 SPACA9Q96E40 222 aaPredicted RBP16.02■□□□□ 0.16
MDC1-206ENST00000489540 C3orf30Q96M34 536 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 SORT1Q99523 831 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 C20orf27Q9GZN8 174 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 REEP4Q9H6H4 257 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 BAIAP2L1Q9UHR4 511 aa16.02■□□□□ 0.16
MDC1-206ENST00000489540 ATP6AP2A0A1C7CYW4 349 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 PLOD3O60568 738 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 TBX19O60806 448 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 ATP6AP2O75787 350 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 CBX7O95931 251 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 FBXO45P0C2W1 286 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 CNR1P21554 472 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 MST1P26927 711 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 NTSP30990 170 aa16.02■□□□□ 0.15
MDC1-206ENST00000489540 PTGER1P34995 402 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms