RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CHRNB4P30926 498 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 ALDH9A1P49189 494 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 PRKAA2P54646 552 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 NTRK2Q16620 822 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 C6orf163Q5TEZ5 329 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 BICRALQ6AI39 1079 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 FAM180BQ6P0A1 224 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC48A1Q6P1K1 146 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 FAM111BQ6SJ93 734 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 MEX3BQ6ZN04 569 aaKnown RBP10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 GPRIN3Q6ZVF9 776 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 ACAD11Q709F0 780 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 PRR22Q8IZ63 422 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 ADCY4Q8NFM4 1077 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 OR7G1Q8NGA0 311 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 OR10Q1Q8NGQ4 319 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 ASB5Q8WWX0 329 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 DIO2Q92813 273 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 ADIPOR1Q96A54 375 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 TP53INP1Q96A56 240 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 TMEM237Q96Q45 408 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 SPOCK3Q9BQ16 436 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 DOHHQ9BU89 302 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 TXLNGYQ9BZA5 131 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 NMRK1Q9NWW6 199 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 SPRR3Q9UBC9 169 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 VPS29Q9UBQ0 182 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 TBK1Q9UHD2 729 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 NPFFR2Q9Y5X5 522 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 ADGRG4Q8IZF6 3080 aa10.97□□□□□ -0.65
CCHCR1-215ENST00000488920 ABCA12Q86UK0 2595 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 GTF3C1Q12789 2109 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 C1orf226A1L170 272 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 GOLGA6L10A6NI86 522 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 CAPN14A8MX76 684 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 TP53I11O14683 189 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 HCN1O60741 890 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 ULK1O75385 1050 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 ESRRBO95718 433 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 KRT6AP02538 564 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 KRT6BP04259 564 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 GLI4P10075 376 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 CSNK2A2P19784 350 aaPredicted RBP10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 ENDOUP21128 410 aaKnown RBP10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 KRT6CP48668 564 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 TRPC1P48995 793 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 DUSP2Q05923 314 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 MGAT2Q10469 447 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 EXOSC7Q15024 291 aaKnown RBP10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 RASA2Q15283 850 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 WLSQ5T9L3 541 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 RTL6Q6ICC9 239 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 LCA5Q86VQ0 697 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 GSPT2Q8IYD1 628 aaKnown RBP10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 LRRC25Q8N386 305 aaPredicted RBP10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 VWA5B2Q8N398 1253 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 LRRN4CLQ8ND94 238 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 SIMC1Q8NDZ2 872 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 METTL6Q8TCB7 284 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 SPPL2AQ8TCT8 520 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 CHTF18Q8WVB6 975 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 SARAFQ96BY9 339 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 KLHL29Q96CT2 875 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 LURAP1Q96LR2 239 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 ZNF382Q96SR6 550 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 TTYH2Q9BSA4 534 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 FAIM2Q9BWQ8 316 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 BRINP2Q9C0B6 783 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 ENKD1Q9H0I2 346 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC6A15Q9H2J7 730 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 EPB41L4BQ9H329 900 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 ZNF703Q9H7S9 590 aaPredicted RBP10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 KCNJ16Q9NPI9 418 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 PSMC3IPQ9P2W1 217 aaPredicted RBP10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 BCAP29Q9UHQ4 241 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 PSME2Q9UL46 239 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 DTX4Q9Y2E6 619 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 FAM215AQ9Y5M1 114 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 CSMD1Q96PZ7 3565 aa10.96□□□□□ -0.65
CCHCR1-215ENST00000488920 NCOA6Q14686 2063 aaPredicted RBP10.96□□□□□ -0.66
CCHCR1-215ENST00000488920 DCHS2Q6V1P9 2916 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 A0A1W2PPM1 405 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 ANKRD33BA6NCL7 494 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 FIGNL2A6NMB9 653 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 TRIM3O75382 744 aaPredicted RBP10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 TRAPPC6AO75865 159 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 TOXO94900 526 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 ATP1B1P05026 303 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 GPX3P22352 226 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 GDF1P27539 372 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 HMOX2P30519 316 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 SSTR2P30874 369 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 HTR6P50406 440 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 NRG3P56975 720 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 KRTAP10-9P60411 292 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 HMGCS1Q01581 520 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 BTKQ06187 659 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 MAP4K2Q12851 820 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 DUSP8Q13202 625 aa10.95□□□□□ -0.66
CCHCR1-215ENST00000488920 RPS6KA2Q15349 733 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms