RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 NPIPA2E9PIF3 369 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 NPIPA3F8WFD2 350 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 C19orf84I3L1E1 186 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 TP53I11O14683 189 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 NT5EP21589 574 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 MAN2A2P49641 1150 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 PKNOX1P55347 436 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 LCP2Q13094 533 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 SLC10A1Q14973 349 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 GXYLT1Q4G148 440 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 PRAMEF20Q5VT98 475 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 ACAD11Q709F0 780 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 VWA5B2Q8N398 1253 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 C1orf52Q8N6N3 182 aaKnown RBP21.25■□□□□ 0.99
CUL4A-209ENST00000488558 GBP7Q8N8V2 638 aaPredicted RBP21.25■□□□□ 0.99
CUL4A-209ENST00000488558 ADIPOR1Q96A54 375 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 SARAFQ96BY9 339 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 SPOCK3Q9BQ16 436 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 TRIM8Q9BZR9 551 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 MCM8Q9UJA3 840 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 PSME2Q9UL46 239 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 CFL2Q9Y281 166 aa21.25■□□□□ 0.99
CUL4A-209ENST00000488558 CREBBPQ92793 2442 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 ATP6AP2A0A1C7CYW4 349 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 LRRC3CA6NJW4 275 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 ENO4A6NNW6 628 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 ULK1O75385 1050 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 ATP6AP2O75787 350 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 ENO1P06733 434 aaKnown RBP21.24■□□□□ 0.99
CUL4A-209ENST00000488558 CELA3AP09093 270 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 CSNK2A2P19784 350 aaPredicted RBP21.24■□□□□ 0.99
CUL4A-209ENST00000488558 S1PR1P21453 382 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 CHRNB4P30926 498 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 DEKP35659 375 aaKnown RBP21.24■□□□□ 0.99
CUL4A-209ENST00000488558 NRG3P56975 720 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 MAP4K2Q12851 820 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 PRICKLE4Q2TBC4 344 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 TCHHL1Q5QJ38 904 aaPredicted RBP21.24■□□□□ 0.99
CUL4A-209ENST00000488558 CHTF18Q8WVB6 975 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 RND1Q92730 232 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 TRIM44Q96DX7 344 aaPredicted RBP21.24■□□□□ 0.99
CUL4A-209ENST00000488558 CCDC126Q96EE4 140 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 HBEGFQ99075 208 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 PNPLA3Q9NST1 481 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 B4GALT7Q9UBV7 327 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 DCDC2Q9UHG0 476 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 NPFFR2Q9Y5X5 522 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 FBN2P35556 2912 aa21.24■□□□□ 0.99
CUL4A-209ENST00000488558 CCDC151A5D8V7 595 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 GOLGA8RI6L899 631 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 PYGBP11216 843 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 GPX3P22352 226 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 ACVR2AP27037 513 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 HMOX2P30519 316 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 NAA20P61599 178 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 METTL6Q8TCB7 284 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 KLHL29Q96CT2 875 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 ZNF597Q96LX8 424 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 TREX2Q9BQ50 279 aaPredicted RBP21.23■□□□□ 0.99
CUL4A-209ENST00000488558 DOHHQ9BU89 302 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 ENKD1Q9H0I2 346 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 PPCSQ9HAB8 311 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 ACKR4Q9NPB9 350 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 MAT2BQ9NZL9 334 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 ZNF639Q9UID6 485 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 RNF6Q9Y252 685 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 PKDREJQ9NTG1 2253 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 NCKAP5O14513 1909 aa21.23■□□□□ 0.99
CUL4A-209ENST00000488558 TRGV5A0A0B4J1U4 118 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 WDR1O75083 606 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 GLRA3O75311 464 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 TRIM3O75382 744 aaPredicted RBP21.22■□□□□ 0.99
CUL4A-209ENST00000488558 ERAL1O75616 437 aaKnown RBP21.22■□□□□ 0.99
CUL4A-209ENST00000488558 ESRRBO95718 433 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 KIR3DL1P43629 444 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 RPP38P78345 283 aaKnown RBP21.22■□□□□ 0.99
CUL4A-209ENST00000488558 MGAT2Q10469 447 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 SPIN4Q56A73 249 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 SRRM1Q8IYB3 904 aaKnown RBP21.22■□□□□ 0.99
CUL4A-209ENST00000488558 RPRMLQ8N4K4 120 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 OR5M3Q8NGP4 307 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 LILRB4Q8NHJ6 448 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 SPPL2AQ8TCT8 520 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 DIO2Q92813 273 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 CTHRC1Q96CG8 243 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 ZNF681Q96N22 645 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 ACPTQ9BZG2 426 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 LDAHQ9H6V9 325 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 PCDHGB3Q9Y5G1 929 aa21.22■□□□□ 0.99
CUL4A-209ENST00000488558 SERTM1A2A2V5 107 aa21.21■□□□□ 0.99
CUL4A-209ENST00000488558 SNX4O95219 450 aa21.21■□□□□ 0.99
CUL4A-209ENST00000488558 RFPL3SP0C7P2 107 aa21.21■□□□□ 0.99
CUL4A-209ENST00000488558 DRD2P14416 443 aa21.21■□□□□ 0.99
CUL4A-209ENST00000488558 NAGAP17050 411 aa21.21■□□□□ 0.99
CUL4A-209ENST00000488558 NUP107P57740 925 aa21.21■□□□□ 0.99
CUL4A-209ENST00000488558 FBXW4P57775 412 aa21.21■□□□□ 0.99
CUL4A-209ENST00000488558 WLSQ5T9L3 541 aa21.21■□□□□ 0.99
CUL4A-209ENST00000488558 GALNT18Q6P9A2 607 aa21.21■□□□□ 0.99
CUL4A-209ENST00000488558 GSPT2Q8IYD1 628 aaKnown RBP21.21■□□□□ 0.99
CUL4A-209ENST00000488558 MMP21Q8N119 569 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms