RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TOX4O94842 621 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 UNC5CO95185 931 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 RASAL1O95294 804 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 SIX3O95343 332 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 ACSL3O95573 720 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 S100BP04271 92 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 SERPINA6P08185 405 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 GNAZP19086 355 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 STX2P32856 288 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 SPRP35270 261 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 AHRP35869 848 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 MSH2P43246 934 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 LIM2P55344 173 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 SRSF2Q01130 221 aaKnown RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 IRF8Q02556 426 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 OR1C1Q15619 314 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 PDK4Q16654 411 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 MEP1AQ16819 746 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 GRTP1Q5TC63 336 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF324BQ6AW86 544 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 GFRALQ6UXV0 394 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 TMIGD1Q6UXZ0 262 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 RPS27LQ71UM5 84 aaKnown RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 GALNTL5Q7Z4T8 443 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 ADGRE4PQ86SQ3 457 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 ISCA2Q86U28 154 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 MYLK4Q86YV6 388 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 OR4N5Q8IXE1 308 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 KLHDC8AQ8IYD2 350 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 CENPLQ8N0S6 344 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 TBC1D19Q8N5T2 526 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 TEX9Q8N6V9 391 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 BCORP1Q8N888 145 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 PDPRQ8NCN5 879 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 MDS2Q8NDY4 140 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 NFAM1Q8NET5 270 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 IFT81Q8WYA0 676 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 NR4A3Q92570 626 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 HAS2Q92819 552 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 UCN3Q969E3 161 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 NCLNQ969V3 563 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 KIAA1191Q96A73 305 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 FAR2Q96K12 515 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 UBXN10Q96LJ8 280 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 C5orf34Q96MH7 638 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 QRFPRQ96P65 431 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 OR1F2PQ96R84 312 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 ATOH8Q96SQ7 321 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 SLX1AQ9BQ83 275 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 REXO4Q9GZR2 422 aaKnown RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 RAB17Q9H0T7 212 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 VPS11Q9H270 941 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 SLC6A15Q9H2J7 730 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 OR51B5Q9H339 312 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 CDC42EP4Q9H3Q1 356 aaKnown RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 MMP25Q9NPA2 562 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 PRTFDC1Q9NRG1 225 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 SNX15Q9NRS6 342 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 ING3Q9NXR8 418 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 CPSF2Q9P2I0 782 aaKnown RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 PTBP2Q9UKA9 531 aaKnown RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 CLDN16Q9Y5I7 305 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 UTP20O75691 2785 aaKnown RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 FLNCQ14315 2725 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 A0A096LPK6 155 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 IGKV3D-11A0A0A0MRZ8 115 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 A0A1W2PR48 441 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ANKDD1BA6NHY2 528 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 SAGE2PA6NJ88 616 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 NPIPA5E9PKD4 350 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 POC1B-GALNT4F8VUJ3 575 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 G3V3Y1 287 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 B3GALT2O43825 422 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 KERAO60938 352 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 NEURL1O76050 574 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ALDOAP04075 364 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 C2P06681 752 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 LTA4HP09960 611 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 RNH1P13489 461 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ICAM2P13598 275 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 MTHFD2P13995 350 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 JAK1P23458 1154 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ECHS1P30084 290 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 HNMTP50135 292 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 NEK2P51955 445 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 RAB38P57729 211 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 ATP6V0D1P61421 351 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 STXBP1P61764 594 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 CKAP4Q07065 602 aaKnown RBP5.49□□□□□ -1.53
CDHR3-213ENST00000488386 SLC13A2Q13183 592 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 EXT1Q16394 746 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 MAPKAPK3Q16644 382 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 PFKFB4Q16877 469 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 TOR2AQ5JU69 321 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 SULT1C3Q6IMI6 304 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 H3F3CQ6NXT2 135 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 TRIM40Q6P9F5 258 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 C3P1Q6ZMU1 363 aa5.49□□□□□ -1.53
CDHR3-213ENST00000488386 DGAT2L6Q6ZPD8 337 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms