RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 OR2B3O76000 313 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 PGM3O95394 542 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 IFNA14P01570 189 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 ANKRD34CP0C6C1 535 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 FOLR1P15328 257 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF23P17027 643 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 AVPR1BP47901 424 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 ANXA11P50995 505 aaKnown RBP8.85□□□□□ -0.99
SF3B1-211ENST00000487698 PRKAG1P54619 331 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 ITGA1P56199 1179 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 MGAT2Q10469 447 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 PROX2Q3B8N5 592 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 RPS26P11Q5JNZ5 115 aaPredicted RBP8.85□□□□□ -0.99
SF3B1-211ENST00000487698 EXOSC6Q5RKV6 272 aaKnown RBP8.85□□□□□ -0.99
SF3B1-211ENST00000487698 MFSD12Q6NUT3 480 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM71Q6P5X7 295 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 TBPL2Q6SJ96 375 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF574Q6ZN55 896 aaPredicted RBP8.85□□□□□ -0.99
SF3B1-211ENST00000487698 SVOPLQ8N434 492 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 EID2Q8N6I1 236 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 OR1L3Q8NH93 324 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 APOBEC4Q8WW27 367 aaKnown RBP8.85□□□□□ -0.99
SF3B1-211ENST00000487698 N4BP2L2Q92802 583 aaPredicted RBP8.85□□□□□ -0.99
SF3B1-211ENST00000487698 NAT6Q93015 286 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 C16orf58Q96GQ5 468 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 TPD52L3Q96J77 140 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 TREX2Q9BQ50 279 aaPredicted RBP8.85□□□□□ -0.99
SF3B1-211ENST00000487698 RSPO3Q9BXY4 272 aaPredicted RBP8.85□□□□□ -0.99
SF3B1-211ENST00000487698 RUBCNLQ9H714 662 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 BCL2L10Q9HD36 194 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 CUTCQ9NTM9 273 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 DDX18Q9NVP1 670 aaKnown RBP8.85□□□□□ -0.99
SF3B1-211ENST00000487698 VNN3Q9NY84 501 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 CLDN16Q9Y5I7 305 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 GPR179Q6PRD1 2367 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF318Q5VUA4 2279 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 COL5A1P20908 1838 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 A0A0C4DFX4 3053 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 PRAMEF25A6NGN4 478 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 C5orf58C9J3I9 102 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 TGFBR3LH3BV60 316 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 hCG_2039718K7EN88 272 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 PLOD3O60568 738 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 CPNE6O95741 557 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 RECKO95980 971 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 SLC35E2P0CK97 266 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 CD247P20963 164 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 PPP2R1BP30154 601 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 DCTP40126 519 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 ARL4DP49703 201 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 IST1P53990 364 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MAT1AQ00266 395 aaKnown RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 SYPL1Q16563 259 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 PRICKLE4Q2TBC4 344 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 IFI44LQ53G44 452 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 NHSL2Q5HYW2 709 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 SNAP47Q5SQN1 464 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 OR2T5Q6IEZ7 315 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM179BQ7Z7N9 219 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 ARMC8Q8IUR7 673 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF595Q8IYB9 648 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 SIMC1Q8NDZ2 872 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 OR2T29Q8NH02 315 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 LZICQ8WZA0 190 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 COL26A1Q96A83 441 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 CTHRC1Q96CG8 243 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF501Q96CX3 271 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MVB12AQ96EY5 273 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MMABQ96EY8 250 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 OR7D2Q96RA2 312 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 OSBPL11Q9BXB4 747 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 ACTRT3Q9BYD9 372 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 THSD1Q9NS62 852 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 IRAK4Q9NWZ3 460 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MAT2BQ9NZL9 334 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 TRPC4Q9UBN4 977 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 C19orf53Q9UNZ5 99 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 CLCA2Q9UQC9 943 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MRPS33Q9Y291 106 aaKnown RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 RALGAPA1Q6GYQ0 2036 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 FRYLO94915 3013 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 WDFY4Q6ZS81 3184 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 COL27A1Q8IZC6 1860 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM247A6NEH6 219 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 SLC28A2O43868 658 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 PDE9AO76083 593 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MFN2O95140 757 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 ALPLP05186 524 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 RPLP0P05388 317 aaKnown RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 SYPP08247 313 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 CKMT1AP12532 417 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 ARSFP54793 590 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 CCL7P80098 99 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 MED21Q13503 144 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 LPAL2Q16609 132 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 SYT16Q17RD7 645 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 FAM214AQ32MH5 1076 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 TRMT12Q53H54 448 aaKnown RBP8.84□□□□□ -0.99
SF3B1-211ENST00000487698 C6orf52Q5T4I8 152 aa8.84□□□□□ -0.99
SF3B1-211ENST00000487698 PRAMEF8Q5VWM4 474 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms