RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TMPRSS11AQ6ZMR5 421 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TMEM179BQ7Z7N9 219 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 LRRC25Q8N386 305 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 OR52E4Q8NGH9 312 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 OR5M3Q8NGP4 307 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 SLC38A5Q8WUX1 472 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 RPL3LQ92901 407 aaKnown RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 PDXPQ96GD0 296 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 MRGPRX3Q96LB0 322 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 HHIPQ96QV1 700 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 PELI2Q9HAT8 420 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 IKZF2Q9UKS7 526 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 C2orf74A8MZ97 194 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 SNPHO15079 494 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 PRAMEF10O60809 474 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 TSC22D2O75157 780 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 HIST1H1TP22492 207 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 ACSL1P33121 698 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 HHEXQ03014 270 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF33BQ06732 778 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF829Q3KNS6 432 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 CHMP1BQ7LBR1 199 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 SNX29P2Q8IUI4 249 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 PEX11GQ96HA9 241 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 AMBRA1Q9C0C7 1298 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 SERGEFQ9UGK8 458 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 POLR1DQ9Y2S0 133 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 SNX11Q9Y5W9 270 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 CLCA3PQ9Y6N3 262 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 DOCK6Q96HP0 2047 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 WDR90Q96KV7 1748 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 TCRBV5S2A0A599 114 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 ACOX3O15254 700 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 LILRB3O75022 631 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 GPX2P18283 190 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 AHCYP23526 432 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 MAD2L1BPQ15013 274 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 PTGES3Q15185 160 aaKnown RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 MOGQ16653 247 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 TMEM35AQ53FP2 167 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 KRT74Q7RTS7 529 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 OR51G2Q8NGK0 314 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 CCL4L1Q8NHW4 92 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 PATE1Q8WXA2 126 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 FAM3CQ92520 227 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 RFKQ969G6 155 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 RSPRY1Q96DX4 576 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 FAM46AQ96IP4 442 aaKnown RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 COQ10AQ96MF6 247 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 PAK1IP1Q9NWT1 392 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 OTOL1A6NHN0 477 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 HAT1O14929 419 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 TSPAN9O75954 239 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 MRPL3P09001 348 aaKnown RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 TRAM2Q15035 370 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 TPRG1LQ5T0D9 272 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 USP43Q70EL4 1123 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 IKBIPQ70UQ0 350 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 B3GNT8Q7Z7M8 397 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 DGAT2Q96PD7 388 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 TREX2Q9BQ50 279 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-216ENST00000486741 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
HMGN1-216ENST00000486741 DAPL1A0PJW8 107 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 PCDHGA12O60330 932 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 IFNGP01579 166 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 CDK4P11802 303 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 S100A1P23297 94 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 EPHA2P29317 976 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 ARPC4P59998 168 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 DUSP7Q16829 419 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 SLC30A6Q6NXT4 461 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 ARL9Q6T311 187 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 LUZP2Q86TE4 346 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 UXS1Q8NBZ7 420 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 OR2L5Q8NG80 312 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 SNX33Q8WV41 574 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 DEPDC7Q96QD5 511 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 MAU2Q9Y6X3 613 aa12.52□□□□□ -0.4
HMGN1-216ENST00000486741 FOXE1O00358 373 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-216ENST00000486741 NRG2O14511 850 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-216ENST00000486741 CDRT1O95170 752 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 GADD45AP24522 165 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 BMXP51813 675 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 IL18Q14116 193 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 LTB4RQ15722 352 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF404Q494X3 552 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 GJD3Q8N144 294 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 SLC15A4Q8N697 577 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 NDNFQ8TB73 568 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 ARSGQ96EG1 525 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 TOE1Q96GM8 510 aaKnown RBP12.52□□□□□ -0.41
HMGN1-216ENST00000486741 PHOX2BQ99453 314 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 KLHL31Q9H511 634 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 SPATA6Q9NWH7 488 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-216ENST00000486741 SPHK1Q9NYA1 384 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 ADAM30Q9UKF2 790 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 WDR37Q9Y2I8 494 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 PCDHGA2Q9Y5H1 932 aa12.52□□□□□ -0.41
HMGN1-216ENST00000486741 PGRMC2O15173 223 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms