RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 TEP1Q99973 2627 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 A0A0G2JND7 137 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TRBV11-1A0A0K0K1C0 115 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 C2orf92A0A1B0GVN3 265 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 A0A1W2PRB8 838 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 GABRR3A8MPY1 467 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 MYO1GB0I1T2 1018 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 SCAMP2O15127 329 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 CFLARO15519 480 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 PLOD3O60568 738 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 PRKRAO75569 313 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 LRATO95237 230 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 KRT16P08779 473 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TACR1P25103 407 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 KIR3DL1P43629 444 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 IDH3AP50213 366 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 RPP38P78345 283 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 MRPS22P82650 360 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 PRR5P85299 388 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 CHAF1BQ13112 559 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 MFAP5Q13361 173 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TP53BP2Q13625 1128 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 MLC1Q15049 377 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TLR1Q15399 786 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 SPDYE7PQ495Y7 208 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 ACER2Q5QJU3 275 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 CPZQ66K79 652 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 H3F3CQ6NXT2 135 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 OPN5Q6U736 354 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 IGFL3Q6UXB1 125 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 CPLX4Q7Z7G2 160 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 PTRH1Q86Y79 214 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TMEM156Q8N614 296 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TRIML2Q8N7C3 387 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 NFAM1Q8NET5 270 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 NUBPLQ8TB37 319 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 SLC22A8Q8TCC7 542 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 BRIX1Q8TDN6 353 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 OR5P2Q8WZ92 322 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 HAS2Q92819 552 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 GFM2Q969S9 779 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TP53INP1Q96A56 240 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TMEM125Q96AQ2 219 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 COQ8BQ96D53 544 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 CNRIP1Q96F85 164 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 CHMP6Q96FZ7 201 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 MAELQ96JY0 434 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF681Q96N22 645 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 AMDHD1Q96NU7 426 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 RNF32Q9H0A6 362 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 RMND5AQ9H871 391 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 NEUROD4Q9HD90 331 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 NPHS2Q9NP85 383 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 AIG1Q9NVV5 245 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 ZIM2Q9NZV7 527 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 HEY2Q9UBP5 337 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 DCTN4Q9UJW0 460 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 ERVK-19Q9WJR5 959 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 PCDHGB3Q9Y5G1 929 aa7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TLN1Q9Y490 2541 aaKnown RBP7.7□□□□□ -1.18
SF3A1-208ENST00000485618 TEX15Q9BXT5 2789 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 NUP210LQ5VU65 1888 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 A0A087WV62 115 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 PRSS51A0A1B0GVH4 220 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 GMNCA6NCL1 334 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 E9PBE3 544 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 PLOD2O00469 737 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 ACOX3O15254 700 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 DDAH2O95865 285 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 JUNP05412 331 aaKnown RBP7.69□□□□□ -1.18
SF3A1-208ENST00000485618 ITGAMP11215 1152 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 CD46P15529 392 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 KRT20P35900 424 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 CYB561P49447 251 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 TMED10P49755 219 aaKnown RBP7.69□□□□□ -1.18
SF3A1-208ENST00000485618 ANXA11P50995 505 aaKnown RBP7.69□□□□□ -1.18
SF3A1-208ENST00000485618 ARFIP2P53365 341 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 DIO3P55073 304 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 RNF4P78317 190 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 OC90Q02509 493 aaPredicted RBP7.69□□□□□ -1.18
SF3A1-208ENST00000485618 FUT7Q11130 342 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 PDE7AQ13946 482 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 PTGR1Q14914 329 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 CEBPEQ15744 281 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 MPEG1Q2M385 716 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 PDCD4Q53EL6 469 aaKnown RBP7.69□□□□□ -1.18
SF3A1-208ENST00000485618 ZCCHC12Q6PEW1 402 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 LINC00696Q6ZRV3 163 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 CAMKMTQ7Z624 323 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 SIRT6Q8N6T7 355 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 APCDD1LQ8NCL9 501 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 C17orf47Q8NEP4 570 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 OR8J2Q8NGG1 315 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 CLHC1Q8NHS4 586 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 ASB15Q8WXK1 588 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 TESCQ96BS2 214 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 DTNBP1Q96EV8 351 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 EGLN2Q96KS0 407 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 SGCZQ96LD1 299 aa7.69□□□□□ -1.18
SF3A1-208ENST00000485618 C5orf34Q96MH7 638 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms