RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SLAMF8Q9P0V8 285 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 PTGFRNQ9P2B2 879 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 VPS4AQ9UN37 437 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 SNX8Q9Y5X2 465 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 AHCTF1Q8WYP5 2266 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 CROCCQ5TZA2 2017 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 A0A087WV62 115 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 PEX12O00623 359 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 AIM2O14862 343 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 EMC8O43402 210 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 ANP32DO95626 131 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 ZCCHC18P0CG32 403 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 T-ENOLP0DO92 83 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 ESRRAP11474 423 aaPredicted RBP16.38■□□□□ 0.21
CHMP3-207ENST00000485465 UQCRC2P22695 453 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 PTPN6P29350 595 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 SOAT1P35610 550 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 EIF2S3P41091 472 aaKnown RBP16.38■□□□□ 0.21
CHMP3-207ENST00000485465 CPA2P48052 419 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 FUT7Q11130 342 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 NFYCQ13952 458 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 SPDYE7PQ495Y7 208 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 LRIF1Q5T3J3 769 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 DLEU7Q6UYE1 221 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 DNAJC14Q6Y2X3 702 aaPredicted RBP16.38■□□□□ 0.21
CHMP3-207ENST00000485465 TMEM64Q6YI46 380 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 DHDDSQ86SQ9 333 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 OR2L13Q8N349 312 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 TRIML2Q8N7C3 387 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 B3GNT7Q8NFL0 401 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 ZNF721Q8TF20 911 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 FAM120BQ96EK7 910 aaKnown RBP16.38■□□□□ 0.21
CHMP3-207ENST00000485465 FBXL20Q96IG2 436 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 ART5Q96L15 291 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 IMMP1LQ96LU5 166 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 OR8D2Q9GZM6 311 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 ANKRA2Q9H9E1 313 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 C3orf14Q9HBI5 128 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 SLC6A13Q9NSD5 602 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 P4HTMQ9NXG6 502 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 NTMQ9P121 344 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 PPIEQ9UNP9 301 aaKnown RBP16.38■□□□□ 0.21
CHMP3-207ENST00000485465 C19orf53Q9UNZ5 99 aaPredicted RBP16.38■□□□□ 0.21
CHMP3-207ENST00000485465 ERVK-19Q9WJR5 959 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 SSUH2Q9Y2M2 353 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 PCDHB14Q9Y5E9 798 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 CACNA1AO00555 2505 aa16.38■□□□□ 0.21
CHMP3-207ENST00000485465 NSG1A0A0A6YYJ2 146 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 CDC14CA4D256 554 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 ZNF891A8MT65 544 aaPredicted RBP16.37■□□□□ 0.21
CHMP3-207ENST00000485465 C1QTNF9BB2RNN3 333 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 UPK1AO00322 258 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 NKX2-8O15522 239 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 EFSO43281 561 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 BCAS2O75934 225 aaPredicted RBP16.37■□□□□ 0.21
CHMP3-207ENST00000485465 CBX7O95931 251 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 HPP00738 406 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 NPPAP01160 153 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 IGKV3-11P04433 115 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 C1QTNF9P0C862 333 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 HOXB9P17482 250 aaPredicted RBP16.37■□□□□ 0.21
CHMP3-207ENST00000485465 SSTR4P31391 388 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 CCT3P49368 545 aaKnown RBP16.37■□□□□ 0.21
CHMP3-207ENST00000485465 GPR143P51810 404 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 SLC26A5P58743 744 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 GAB1Q13480 694 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 ATP1A4Q13733 1029 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 EXOSC7Q15024 291 aaKnown RBP16.37■□□□□ 0.21
CHMP3-207ENST00000485465 GTDC1Q4AE62 458 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 CRTC2Q53ET0 693 aaPredicted RBP16.37■□□□□ 0.21
CHMP3-207ENST00000485465 UNQ6494/PRO21346Q6UXR6 183 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 CLEC4FQ8N1N0 589 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 ZNF321PQ8N8H1 164 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 SIMC1Q8NDZ2 872 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 OR7G1Q8NGA0 311 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 OR1N1Q8NGS0 311 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 SFXN5Q8TD22 340 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 MOAP1Q96BY2 351 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 NUDT9Q9BW91 350 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 IL1RL2Q9HB29 575 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 DDX18Q9NVP1 670 aaKnown RBP16.37■□□□□ 0.21
CHMP3-207ENST00000485465 GID8Q9NWU2 228 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 FBXL4Q9UKA2 621 aa16.37■□□□□ 0.21
CHMP3-207ENST00000485465 TRBV5-3A0A0A0MS03 114 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 RNF103-CHMP3A0A140T963 221 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 EBAG9O00559 213 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 RRP8O43159 456 aaKnown RBP16.36■□□□□ 0.21
CHMP3-207ENST00000485465 CLPSP04118 112 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 CALB2P22676 271 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 MNAT1P51948 309 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 PRR5P85299 388 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 DUSP8Q13202 625 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 ART3Q13508 389 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 EXT1Q16394 746 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 TRMT5Q32P41 509 aaKnown RBP16.36■□□□□ 0.21
CHMP3-207ENST00000485465 ATP1A1-AS1Q5TC04 95 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 SPACA3Q8IXA5 215 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 MSRB3Q8IXL7 192 aa16.36■□□□□ 0.21
CHMP3-207ENST00000485465 AMER2Q8N7J2 671 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms