RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TMED10P49755 219 aaKnown RBP11.91□□□□□ -0.5
HDAC6-227ENST00000485102 HNRNPH2P55795 449 aaKnown RBP11.91□□□□□ -0.5
HDAC6-227ENST00000485102 RAB10P61026 200 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 LTBQ06643 244 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 FUT7Q11130 342 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 CUL3Q13618 768 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 KEAP1Q14145 624 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 ZNF267Q14586 743 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-227ENST00000485102 C18orf63Q68DL7 685 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 TMEM81Q6P7N7 255 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 TRMT10CQ7L0Y3 403 aaKnown RBP11.91□□□□□ -0.5
HDAC6-227ENST00000485102 PACS2Q86VP3 889 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 WFDC11Q8NEX6 87 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 SPPL2AQ8TCT8 520 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 ZPLD1Q8TCW7 415 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 DIO2Q92813 273 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 WDYHV1Q96HA8 205 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 JSRP1Q96MG2 331 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-227ENST00000485102 DACH2Q96NX9 599 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 GAL3ST4Q96RP7 486 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 ATOH8Q96SQ7 321 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 RBBP8Q99708 897 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 PPCSQ9HAB8 311 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 CXorf21Q9HAI6 301 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 NEUROD4Q9HD90 331 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 SAYSD1Q9NPB0 183 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 ZDHHC18Q9NUE0 388 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 LYARQ9NX58 379 aaKnown RBP11.91□□□□□ -0.5
HDAC6-227ENST00000485102 NUDT4Q9NZJ9 180 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 OPTCQ9UBM4 332 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 DMGDHQ9UI17 866 aaKnown RBP11.91□□□□□ -0.5
HDAC6-227ENST00000485102 RNF112Q9ULX5 631 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 C15orf41Q9Y2V0 281 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 PCDHGA11Q9Y5H2 935 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 NPFFR2Q9Y5X5 522 aa11.91□□□□□ -0.5
HDAC6-227ENST00000485102 MED12LQ86YW9 2145 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 A0A0A6YYD5 115 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 C2orf92A0A1B0GVN3 265 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 A0A1W2PR48 441 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 CCDC189A1A4V9 331 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 CXorf49A8MYA2 514 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-227ENST00000485102 H0YIV9 168 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 SAP18O00422 153 aaKnown RBP11.9□□□□□ -0.5
HDAC6-227ENST00000485102 OR10H2O60403 315 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 UGDHO60701 494 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 ERLIN1O75477 346 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 ACSL3O95573 720 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 S100BP04271 92 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-227ENST00000485102 PCNAP12004 261 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 EPB42P16452 691 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 NAGAP17050 411 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 BMP7P18075 431 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 BSGP35613 385 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 GP5P40197 560 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 CASP3P42574 277 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 MAGEA4P43358 317 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 PCYT1AP49585 367 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 RPP38P78345 283 aaKnown RBP11.9□□□□□ -0.5
HDAC6-227ENST00000485102 SHEQ5VZ18 495 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 LIPJQ5W064 366 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 TIGD3Q6B0B8 471 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 CCDC25Q86WR0 208 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 KRTAP1-3Q8IUG1 177 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 SMPDL3BQ92485 455 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 ADIPOR1Q96A54 375 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 TMEM41AQ96HV5 264 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 RILPQ96NA2 401 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 ZFP3Q96NJ6 502 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 UCN2Q96RP3 112 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 SORBS1Q9BX66 1292 aaKnown RBP11.9□□□□□ -0.5
HDAC6-227ENST00000485102 UGT2B28Q9BY64 529 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 EPB41L4BQ9H329 900 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 NMRAL1Q9HBL8 299 aa11.9□□□□□ -0.5
HDAC6-227ENST00000485102 BEX4Q9NWD9 120 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-227ENST00000485102 EXPH5Q8NEV8 1989 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 ESYT3A0FGR9 886 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 FAM159BA6NKW6 160 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 CLCA1A8K7I4 914 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 KERAO60938 352 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 SH3BGRLO75368 114 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 TRAPPC6AO75865 159 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 PIAS1O75925 651 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 ACTL6AO96019 429 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 HRGP04196 525 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 INHBBP09529 407 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 MTHFD2P13995 350 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 CPN1P15169 458 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 CD53P19397 219 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 SSTR1P30872 391 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 RAP1GDS1P52306 607 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 WNT3P56703 355 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 FBXW4P57775 412 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 DCAF7P61962 342 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 EMBQ6PCB8 327 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 ZDHHC24Q6UX98 284 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 C3orf62Q6ZUJ4 267 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 TAOK1Q7L7X3 1001 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 ADGRE4PQ86SQ3 457 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 ZNF615Q8N8J6 731 aa11.89□□□□□ -0.51
HDAC6-227ENST00000485102 RHEBL1Q8TAI7 183 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms