RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 MAGEE2Q8TD90 523 aaPredicted RBP24.64■■□□□ 1.54
SHOX2-204ENST00000483851 RASSF5Q8WWW0 418 aa24.64■■□□□ 1.54
SHOX2-204ENST00000483851 TMEM19Q96HH6 336 aa24.64■■□□□ 1.54
SHOX2-204ENST00000483851 C7orf34Q96L11 122 aa24.64■■□□□ 1.54
SHOX2-204ENST00000483851 CLCA2Q9UQC9 943 aa24.64■■□□□ 1.54
SHOX2-204ENST00000483851 MRPS33Q9Y291 106 aaKnown RBP24.64■■□□□ 1.54
SHOX2-204ENST00000483851 ARID1BQ8NFD5 2236 aaPredicted RBP24.64■■□□□ 1.54
SHOX2-204ENST00000483851 H0YIG0 161 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 CHST10O43529 356 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 FOXS1O43638 330 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 RDH16O75452 317 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 BCHEP06276 602 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 RNH1P13489 461 aaKnown RBP24.64■■□□□ 1.53
SHOX2-204ENST00000483851 MC3RP41968 323 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 ARL4DP49703 201 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 MAPK10P53779 464 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 HIPK1Q86Z02 1210 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 D2HGDHQ8N465 521 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 SLC41A2Q96JW4 573 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 RDH12Q96NR8 316 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 ZNF607Q96SK3 696 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 TUBA8Q9NY65 449 aaPredicted RBP24.64■■□□□ 1.53
SHOX2-204ENST00000483851 PCDH15Q96QU1 1955 aa24.64■■□□□ 1.53
SHOX2-204ENST00000483851 A0A1W2PS29 197 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 H0YAE9 185 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 CFIP05156 583 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 CTSBP07858 339 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 OR12D1P0DN82 309 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 AVPR1BP47901 424 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 ALDH3A2P51648 485 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 ARSFP54793 590 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 VLDLRP98155 873 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 ROR2Q01974 943 aaKnown RBP24.63■■□□□ 1.53
SHOX2-204ENST00000483851 CFHR1Q03591 330 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 FAM214AQ32MH5 1076 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 OR2L13Q8N349 312 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 OR10Q1Q8NGQ4 319 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 RAB8BQ92930 207 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 FBXL20Q96IG2 436 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 MS4A4EQ96PG1 132 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 BCL2L10Q9HD36 194 aa24.63■■□□□ 1.53
SHOX2-204ENST00000483851 IFT80Q9P2H3 777 aaPredicted RBP24.63■■□□□ 1.53
SHOX2-204ENST00000483851 A0A087WV62 115 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 DUXAA6NLW8 204 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 SNAP29O95721 258 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 AGR2O95994 175 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ALPLP05186 524 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 PRKAG1P54619 331 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ITGA1P56199 1179 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 DAG1Q14118 895 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 AMZ1Q400G9 498 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 IQCCQ4KMZ1 466 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 GATAD2AQ86YP4 633 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ZNF675Q8TD23 568 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ADAMTS16Q8TE57 1224 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 CCDC74AQ96AQ1 378 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 MVB12AQ96EY5 273 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 NRBF2Q96F24 287 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ACTRT3Q9BYD9 372 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 GAREM1Q9H706 876 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 THSD1Q9NS62 852 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 DDX18Q9NVP1 670 aaKnown RBP24.62■■□□□ 1.53
SHOX2-204ENST00000483851 USE1Q9NZ43 259 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 TRPC4Q9UBN4 977 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 SLC6A14Q9UN76 642 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 LIPT1Q9Y234 373 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 A0A0A6YYC8 382 aaPredicted RBP24.62■■□□□ 1.53
SHOX2-204ENST00000483851 I3L1I5 382 aaPredicted RBP24.62■■□□□ 1.53
SHOX2-204ENST00000483851 FGF17O60258 216 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 CER1O95813 267 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ITGA2P17301 1181 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ARHGDIAP52565 204 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 CRISP3P54108 245 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 LSAMPQ13449 338 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 LASP1Q14847 261 aaKnown RBP24.62■■□□□ 1.53
SHOX2-204ENST00000483851 SLC23A3Q6PIS1 610 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ZNF595Q8IYB9 648 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 Q8N9G6 341 aaPredicted RBP24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ZBTB44Q8NCP5 570 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 XAGE5Q8WWM1 108 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 CYGBQ8WWM9 190 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 GEMIN6Q8WXD5 167 aaKnown RBP24.62■■□□□ 1.53
SHOX2-204ENST00000483851 ZNF347Q96SE7 839 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 KLHL3Q9UH77 587 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 RAB23Q9ULC3 237 aa24.62■■□□□ 1.53
SHOX2-204ENST00000483851 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 SERPINB7O75635 380 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 ETS2P15036 469 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 CSF2RBP32927 897 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 DCTP40126 519 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 MAPK11Q15759 364 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 ZNF628Q5EBL2 1059 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 SHQ1Q6PI26 577 aaKnown RBP24.61■■□□□ 1.53
SHOX2-204ENST00000483851 BBS10Q8TAM1 723 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 NAT6Q93015 286 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 GIMAP5Q96F15 307 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 MAGED4Q96JG8 741 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 SPATA5L1Q9BVQ7 753 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 IRAK4Q9NWZ3 460 aa24.61■■□□□ 1.53
SHOX2-204ENST00000483851 ABCG2Q9UNQ0 655 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms