RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 Q96MF0 132 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 TUBA1CQ9BQE3 449 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 PELOQ9BRX2 385 aaKnown RBP11.69□□□□□ -0.54
TMEM54-206ENST00000482771 BDH2Q9BUT1 245 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 NDRG3Q9UGV2 375 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 PHF11Q9UIL8 331 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 PPP2R2CQ9Y2T4 447 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 A0A1W2PR48 441 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 C2orf72A6NCS6 295 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 RCBTB2O95199 551 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 WISP3O95389 354 aaPredicted RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 ACTL6AO96019 429 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 S100BP04271 92 aaPredicted RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 SLC35E2BP0CK96 405 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 SLC35E2P0CK97 266 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 CPN1P15169 458 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 GALNSP34059 522 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 BUD31P41223 144 aaPredicted RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 ARL4CP56559 192 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 NRG3P56975 720 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 ATP6V0D1P61421 351 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 RPP38P78345 283 aaKnown RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 E2F2Q14209 437 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 ZCCHC7Q8N3Z6 543 aaKnown RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 FBXO36Q8NEA4 188 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 FAM83FQ8NEG4 500 aaPredicted RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 OR1J4Q8NGS1 313 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 SPATA3Q8NHX4 192 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 HUS1BQ8NHY5 278 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 EXT2Q93063 718 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 OSBPL9Q96SU4 736 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 SECISBP2Q96T21 854 aaKnown RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 MTERF1Q99551 399 aaKnown RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 PIP5K1AQ99755 562 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 TM9SF2Q99805 663 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 CENPKQ9BS16 269 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 MCMBPQ9BTE3 642 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 SFXN3Q9BWM7 321 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 CXorf21Q9HAI6 301 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 C6orf203Q9P0P8 240 aaPredicted RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 FETUBQ9UGM5 382 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 RNF112Q9ULX5 631 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 ASB4Q9Y574 426 aa11.68□□□□□ -0.54
TMEM54-206ENST00000482771 SONP18583 2426 aaKnown RBP11.68□□□□□ -0.54
TMEM54-206ENST00000482771 TRIM64A6NGJ6 449 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 TRIM64BA6NI03 449 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 A8MXE2 369 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 INAFM1C9JVW0 142 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 PLPP1O14494 284 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 EEDO75530 441 aaKnown RBP11.67□□□□□ -0.54
TMEM54-206ENST00000482771 ABCB1P08183 1280 aaPredicted RBP11.67□□□□□ -0.54
TMEM54-206ENST00000482771 PTX3P26022 381 aaPredicted RBP11.67□□□□□ -0.54
TMEM54-206ENST00000482771 PTPN6P29350 595 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 SERPINB1P30740 379 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 PPP2R2BQ00005 443 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 PDIA2Q13087 525 aaKnown RBP11.67□□□□□ -0.54
TMEM54-206ENST00000482771 PRSS57Q6UWY2 283 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 ANGPTL8Q6UXH0 198 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 LRRC70Q7Z2Q7 622 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 YTHDF3Q7Z739 585 aaKnown RBP11.67□□□□□ -0.54
TMEM54-206ENST00000482771 TRIM42Q8IWZ5 723 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 PDPRQ8NCN5 879 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 SIMC1Q8NDZ2 872 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 WNT2BQ93097 391 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 ADIPOR1Q96A54 375 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 TSPAN17Q96FV3 270 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 TMEM41AQ96HV5 264 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 WFIKKN1Q96NZ8 548 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 METTL7AQ9H8H3 244 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 SMYD2Q9NRG4 433 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 NSMCE4AQ9NXX6 385 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 ADGRE2Q9UHX3 823 aa11.67□□□□□ -0.54
TMEM54-206ENST00000482771 USF3Q68DE3 2245 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 A0A1W2PS29 197 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 H0Y3Z8 333 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 PGRMC2O15173 223 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 TMPRSS11DO60235 418 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 FAM58BPP0C7Q3 252 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 KRT15P19012 456 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 GCKP35557 465 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 BSGP35613 385 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 GMPRP36959 345 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 PIK3CBP42338 1070 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 STARP49675 285 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 TMED10P49755 219 aaKnown RBP11.66□□□□□ -0.54
TMEM54-206ENST00000482771 DIO3P55073 304 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 RPS13P62277 151 aaKnown RBP11.66□□□□□ -0.54
TMEM54-206ENST00000482771 FUT7Q11130 342 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 GAB1Q13480 694 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 FASTKD3Q14CZ7 662 aaKnown RBP11.66□□□□□ -0.54
TMEM54-206ENST00000482771 ACKR1Q16570 336 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 DESI1Q6ICB0 168 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 MRM1Q6IN84 353 aaKnown RBP11.66□□□□□ -0.54
TMEM54-206ENST00000482771 CYP20A1Q6UW02 462 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 CXXC5Q7LFL8 322 aaKnown RBP11.66□□□□□ -0.54
TMEM54-206ENST00000482771 MYLK4Q86YV6 388 aaPredicted RBP11.66□□□□□ -0.54
TMEM54-206ENST00000482771 GCNT2Q8N0V5 402 aa11.66□□□□□ -0.54
TMEM54-206ENST00000482771 ZNF615Q8N8J6 731 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms