RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 PCDH1Q08174 1060 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 STX4Q12846 297 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 ZNF155Q12901 538 aaPredicted RBP8.67□□□□□ -1.02
CALD1-220ENST00000482470 C6orf132Q5T0Z8 1188 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 C18orf63Q68DL7 685 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 FAAH2Q6GMR7 532 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 FAM71E1Q6IPT2 247 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 LCTLQ6UWM7 567 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 ADGRD2Q7Z7M1 963 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 AKAP14Q86UN6 197 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 ACOT4Q8N9L9 421 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 OR10H4Q8NGA5 316 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 GATAD2BQ8WXI9 593 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 DNAJA3Q96EY1 480 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 TMEM80Q96HE8 168 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 CSF3RQ99062 836 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 GPR34Q9UPC5 381 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 MGAT4BQ9UQ53 548 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 CFL2Q9Y281 166 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 CARD8Q9Y2G2 431 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 PCDHGA2Q9Y5H1 932 aa8.67□□□□□ -1.02
CALD1-220ENST00000482470 FOXE1O00358 373 aaPredicted RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 TSC22D2O75157 780 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 ALOX5P09917 674 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 MASP1P48740 699 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 CD97P48960 835 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 TAS2R38P59533 333 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 RAE1P78406 368 aaKnown RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 ZNF33BQ06732 778 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 GPR19Q15760 415 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 C22orf42Q6IC83 251 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 FIGNL1Q6PIW4 674 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 ZC3H14Q6PJT7 736 aaKnown RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 B3GLCTQ6Y288 498 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 TMIEQ8NEW7 156 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 TM4SF18Q96CE8 201 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 SPATA9Q9BWV2 254 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 WBP11Q9Y2W2 641 aaKnown RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 MICAL3Q7RTP6 2002 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 SPTBP11277 2137 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 NPIPA5A0A0B4J1W7 369 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 AGAP14A8MT82 685 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 NPIPA7E9PJI5 369 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 CTDSP2O14595 271 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 B3GALT2O43825 422 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 TMPRSS11DO60235 418 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 LCMT2O60294 686 aaKnown RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 CPNE6O95741 557 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 NPIPA8P0DM63 369 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 BMP4P12644 408 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 CELP19835 753 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 TALDO1P37837 337 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 NKX2-5P52952 324 aaPredicted RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 CDH11P55287 796 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 RAB25P57735 213 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 CCNJQ5T5M9 372 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 GTF2IRD2BQ6EKJ0 949 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 CDC73Q6P1J9 531 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 KLHL17Q6TDP4 642 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 GTF2IRD2Q86UP8 949 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 AMIGO1Q86WK6 493 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 IQCF2Q8IXL9 164 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 DNAJC22Q8N4W6 341 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 C9orf43Q8TAL5 461 aaPredicted RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 CRELD1Q96HD1 420 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 FAM46AQ96IP4 442 aaKnown RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 HRASLS5Q96KN8 279 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 SNX7Q9UNH6 387 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 IFT52Q9Y366 437 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 OR6C74A6NCV1 312 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 FABP12A6NFH5 140 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 OTOL1A6NHN0 477 aaPredicted RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 PGRMC2O15173 223 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 CDK1P06493 297 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 PORP16435 677 aaPredicted RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 SMSP52788 366 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 TUBA1BP68363 451 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 RELAQ04206 551 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 PRDX1Q06830 199 aaKnown RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 GRSF1Q12849 480 aaKnown RBP eCLIP8.66□□□□□ -1.02
CALD1-220ENST00000482470 IL18Q14116 193 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 FBXO43Q4G163 708 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 TMEM240Q5SV17 173 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 SLC30A6Q6NXT4 461 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 FBXO46Q6PJ61 603 aaPredicted RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 FAM92BQ6ZTR7 304 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 TUBA1AQ71U36 451 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 DGLUCYQ7Z3D6 616 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 METTL27Q8N6F8 245 aaPredicted RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 DENND6BQ8NEG7 585 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 OR5K2Q8NHB8 316 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 IFT27Q9BW83 186 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 MMP27Q9H306 513 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 KLHL31Q9H511 634 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 SAGE1Q9NXZ1 904 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 NDRG4Q9ULP0 352 aaKnown RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 PPIL1Q9Y3C6 166 aa8.66□□□□□ -1.02
CALD1-220ENST00000482470 DNMT3AQ9Y6K1 912 aaPredicted RBP8.66□□□□□ -1.02
CALD1-220ENST00000482470 DNAJB5O75953 348 aa8.65□□□□□ -1.02
CALD1-220ENST00000482470 FUCA1P04066 466 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms