RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 MINDY4Q4G0A6 757 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 RABL3Q5HYI8 236 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 C3orf38Q5JPI3 329 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 INTS11Q5TA45 600 aaKnown RBP9.51□□□□□ -0.89
USP39-215ENST00000481409 MFSD4BQ5TF39 518 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 PRAMEF8Q5VWM4 474 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 PRAMEF7Q5VXH5 474 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 C6orf120Q7Z4R8 191 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 NLGN4XQ8N0W4 816 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 LGI4Q8N135 537 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 KIF2BQ8N4N8 673 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 METTL27Q8N6F8 245 aaPredicted RBP9.51□□□□□ -0.89
USP39-215ENST00000481409 MORN4Q8NDC4 146 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 NUP43Q8NFH3 380 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 NLGN4YQ8NFZ3 816 aaPredicted RBP9.51□□□□□ -0.89
USP39-215ENST00000481409 OR2T12Q8NG77 320 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 OR9A2Q8NGT5 310 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.51□□□□□ -0.89
USP39-215ENST00000481409 JADE3Q92613 823 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 PMM1Q92871 262 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 MR1Q95460 341 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 UCN3Q969E3 161 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 SLC46A1Q96NT5 459 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 STACQ99469 402 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 SLC39A3Q9BRY0 314 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 VN1R1Q9GZP7 353 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 MAT2BQ9NZL9 334 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 ACTR3BQ9P1U1 418 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 PRODH2Q9UF12 536 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 SLC7A8Q9UHI5 535 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 FAF1Q9UNN5 650 aaPredicted RBP9.51□□□□□ -0.89
USP39-215ENST00000481409 ERVK-11Q9UQG0 969 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 CLDN16Q9Y5I7 305 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 MYO15AQ9UKN7 3530 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 SEC16AO15027 2179 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 EP300Q09472 2414 aaPredicted RBP9.5□□□□□ -0.89
USP39-215ENST00000481409 A0A1W2PQ72 361 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 ELOVL7A1L3X0 281 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 OR6C76A6NM76 312 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 CDRT15L2A8MXV6 281 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 IDSB3KWA1 339 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 H0YHG0 523 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 UPK1AO00322 258 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 ALOX12BO75342 701 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 TNFSF15O95150 251 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 RECKO95980 971 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 IFNA16P05015 189 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 GSNP06396 782 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 GUSBP08236 651 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 SLC5A2P31639 672 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 GSK3BP49841 420 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 GZMMP51124 257 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 MVDP53602 400 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 EMP2P54851 167 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 MTPNP58546 118 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 DCAF7P61962 342 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 RPS15P62841 145 aaKnown RBP9.5□□□□□ -0.89
USP39-215ENST00000481409 KCNJ2P63252 427 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 BTG2P78543 158 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 CEACAM7Q14002 265 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 ZNHIT3Q15649 155 aaPredicted RBP9.5□□□□□ -0.89
USP39-215ENST00000481409 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
USP39-215ENST00000481409 VWA2Q5GFL6 755 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 FHL5Q5TD97 284 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 AP1ARQ63HQ0 302 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 CDC73Q6P1J9 531 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 TMEM205Q6UW68 189 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 FAM198BQ6UWH4 519 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 TMEM107Q6UX40 140 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 DNAJC14Q6Y2X3 702 aaPredicted RBP9.5□□□□□ -0.89
USP39-215ENST00000481409 OR4N5Q8IXE1 308 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 MICU2Q8IYU8 434 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 DTWD1Q8N5C7 304 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 CDRT4Q8N9R6 151 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 GALNT6Q8NCL4 622 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 C11orf65Q8NCR3 313 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 OR2Y1Q8NGV0 311 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 OR10A6Q8NH74 314 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 OIT3Q8WWZ8 545 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 HOXB13Q92826 284 aaPredicted RBP9.5□□□□□ -0.89
USP39-215ENST00000481409 NCLNQ969V3 563 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 UTP4Q969X6 686 aaKnown RBP9.5□□□□□ -0.89
USP39-215ENST00000481409 FBXL20Q96IG2 436 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 SLC35G5Q96KT7 338 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 ZNF583Q96ND8 569 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 SPSB2Q99619 263 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 EFHD1Q9BUP0 239 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 ACTRT3Q9BYD9 372 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 CHST8Q9H2A9 424 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 GORASP2Q9H8Y8 452 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 NECTIN3Q9NQS3 549 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 DUSP22Q9NRW4 184 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 SLC6A13Q9NSD5 602 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 EXD2Q9NVH0 621 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 GPATCH2Q9NW75 528 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 CALML5Q9NZT1 146 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 CTSFQ9UBX1 484 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 KCND3Q9UK17 655 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 PPIEQ9UNP9 301 aaKnown RBP9.5□□□□□ -0.89
USP39-215ENST00000481409 LIPT1Q9Y234 373 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms