RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 SCARB2Q14108 478 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 VEZF1Q14119 521 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 SF3A2Q15428 464 aaKnown RBP9.8□□□□□ -0.84
LINC00173-203ENST00000480237 TRIP10Q15642 601 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 ADRM1Q16186 407 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 SYT16Q17RD7 645 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 ZNF630Q2M218 657 aaPredicted RBP9.8□□□□□ -0.84
LINC00173-203ENST00000480237 FAM98BQ52LJ0 330 aaKnown RBP9.8□□□□□ -0.84
LINC00173-203ENST00000480237 INTS11Q5TA45 600 aaKnown RBP9.8□□□□□ -0.84
LINC00173-203ENST00000480237 IRAK1BP1Q5VVH5 260 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 YOD1Q5VVQ6 348 aaPredicted RBP9.8□□□□□ -0.84
LINC00173-203ENST00000480237 GALNT10Q86SR1 603 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 SLC30A8Q8IWU4 369 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 NFKBIDQ8NI38 313 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 RHBDD1Q8TEB9 315 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 KAT2AQ92830 837 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 MAL2Q969L2 176 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 SLCO4A1Q96BD0 722 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 ZNF501Q96CX3 271 aaPredicted RBP9.8□□□□□ -0.84
LINC00173-203ENST00000480237 MVB12AQ96EY5 273 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 EDEM2Q9BV94 578 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 YIPF2Q9BWQ6 316 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 UGT2B28Q9BY64 529 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 SLC7A5P2Q9GIP4 190 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 VCX3BQ9H321 246 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 CLK4Q9HAZ1 481 aaKnown RBP9.8□□□□□ -0.84
LINC00173-203ENST00000480237 EQTNQ9NQ60 294 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 CCM2LQ9NUG4 571 aaPredicted RBP9.8□□□□□ -0.84
LINC00173-203ENST00000480237 GPATCH2Q9NW75 528 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 RIMS3Q9UJD0 308 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 SRPK3Q9UPE1 567 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 SAMD4AQ9UPU9 718 aaKnown RBP9.8□□□□□ -0.84
LINC00173-203ENST00000480237 MAU2Q9Y6X3 613 aa9.8□□□□□ -0.84
LINC00173-203ENST00000480237 TMEM247A6NEH6 219 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 C5orf58C9J3I9 102 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 H3BMH7 237 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 ZNF749O43361 778 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 OR10H2O60403 315 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 B4GALT2O60909 372 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 CDC123O75794 336 aaPredicted RBP9.79□□□□□ -0.84
LINC00173-203ENST00000480237 BMP10O95393 424 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 FREM3P0C091 2139 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 ZNF806P0C7X5 589 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 ARAFP10398 606 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 FCGR1AP12314 374 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 NT5EP21589 574 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 FBLP22087 321 aaKnown RBP9.79□□□□□ -0.84
LINC00173-203ENST00000480237 PEX2P28328 305 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 AQP1P29972 269 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 XCR1P46094 333 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 MRPS35P82673 323 aaKnown RBP9.79□□□□□ -0.84
LINC00173-203ENST00000480237 STX4Q12846 297 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 LASP1Q14847 261 aaKnown RBP9.79□□□□□ -0.84
LINC00173-203ENST00000480237 C16orf72Q14CZ0 275 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 ARHGAP40Q5TG30 622 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 ENPP6Q6UWR7 440 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 RNF111Q6ZNA4 994 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 ARHGAP22Q7Z5H3 698 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 ZNF595Q8IYB9 648 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 HORMAD2Q8N7B1 307 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 NUP43Q8NFH3 380 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 OR52E4Q8NGH9 312 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 OR51Q1Q8NH59 317 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 FAM110BQ8TC76 370 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 NETO1Q8TDF5 533 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 POP5Q969H6 163 aaKnown RBP9.79□□□□□ -0.84
LINC00173-203ENST00000480237 TBC1D20Q96BZ9 403 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 ELP4Q96EB1 424 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 SLC47A1Q96FL8 570 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 RNF145Q96MT1 663 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 MS4A4EQ96PG1 132 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 OR6C1Q96RD1 312 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 PKP2Q99959 881 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 TMEM38AQ9H6F2 299 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 TMEM9BQ9NQ34 198 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 PRTFDC1Q9NRG1 225 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 DCAF13Q9NV06 445 aaKnown RBP9.79□□□□□ -0.84
LINC00173-203ENST00000480237 DDX18Q9NVP1 670 aaKnown RBP9.79□□□□□ -0.84
LINC00173-203ENST00000480237 ARMC1Q9NVT9 282 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 PDP2Q9P2J9 529 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 DHCR7Q9UBM7 475 aaKnown RBP9.79□□□□□ -0.84
LINC00173-203ENST00000480237 RPS6KA6Q9UK32 745 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 RARRES3Q9UL19 164 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 CDC14AQ9UNH5 594 aa9.79□□□□□ -0.84
LINC00173-203ENST00000480237 EP300Q09472 2414 aaPredicted RBP9.78□□□□□ -0.84
LINC00173-203ENST00000480237 MYOCOSA0A1B0GUC4 107 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 A0A1B0GX78 115 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 CLDN4O14493 209 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 HNRNPRO43390 633 aaKnown RBP9.78□□□□□ -0.84
LINC00173-203ENST00000480237 MT-ND1P03886 318 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 BCHEP06276 602 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 GP1BAP07359 652 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 MATN1P21941 496 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 ACP1P24666 158 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 OR1D4P47884 311 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 CDK6Q00534 326 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 GRAMD1BQ3KR37 738 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 MFSD4BQ5TF39 518 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 ERMP1Q7Z2K6 904 aa9.78□□□□□ -0.84
LINC00173-203ENST00000480237 TMEM126BQ8IUX1 230 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms