RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 MPEG1Q2M385 716 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 NADK2Q4G0N4 442 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 ZNF628Q5EBL2 1059 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 SLC6A19Q695T7 634 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 TUBA3EQ6PEY2 450 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 FAM111BQ6SJ93 734 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 C9orf40Q8IXQ3 194 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 TMEM156Q8N614 296 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 NATD1Q8N6N6 113 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 HORMAD2Q8N7B1 307 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 ADCY4Q8NFM4 1077 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 SUN3Q8TAQ9 357 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 ACTRT2Q8TDY3 377 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 DOK4Q8TEW6 326 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 THAP3Q8WTV1 239 aaPredicted RBP10.05□□□□□ -0.8
ATG4B-219ENST00000479941 MFRPQ9BY79 579 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.05□□□□□ -0.8
ATG4B-219ENST00000479941 WDR55Q9H6Y2 383 aaPredicted RBP10.05□□□□□ -0.8
ATG4B-219ENST00000479941 SLAMF7Q9NQ25 335 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 ATAD3AQ9NVI7 634 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 PLA2G3Q9NZ20 509 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 ATP6V1HQ9UI12 483 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 ZNF639Q9UID6 485 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 USH1CQ9Y6N9 552 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 CROCCQ5TZA2 2017 aa10.05□□□□□ -0.8
ATG4B-219ENST00000479941 RP1L1Q8IWN7 2480 aaPredicted RBP10.05□□□□□ -0.8
ATG4B-219ENST00000479941 GOLGA8QA0A0J9YX86 632 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 C2orf92A0A1B0GVN3 265 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 GOLGA8OA6NCC3 632 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 GOLGA8NF8WBI6 632 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 WWP2O00308 870 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 PDPK1O15530 556 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 SUV39H1O43463 412 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 PLOD3O60568 738 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 PRAMEF2O60811 474 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 OR2J2O76002 312 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 CBX7O95931 251 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 IFI6P09912 130 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 SSTR4P31391 388 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 CD96P40200 585 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 FRKP42685 505 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 HLCSP50747 726 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 SSR4P51571 173 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 CLDN8P56748 225 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 MRPS35P82673 323 aaKnown RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 OC90Q02509 493 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 ZNF169Q14929 603 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 EBPQ15125 230 aaKnown RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 LTB4RQ15722 352 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 PRSS53Q2L4Q9 553 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 PLEKHN1Q494U1 663 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 SLC9B1Q4ZJI4 515 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 TRMT12Q53H54 448 aaKnown RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 CPTPQ5TA50 214 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 HLA-DQA1Q5Y7H0 255 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 EPGNQ6UW88 154 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 FAM47EQ6ZV65 393 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 SPATA19Q7Z5L4 167 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 RIMKLAQ8IXN7 391 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 GPALPP1Q8IXQ4 340 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 SLC15A4Q8N697 577 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 ZNF615Q8N8J6 731 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 C17orf47Q8NEP4 570 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 OR9A2Q8NGT5 310 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 CEP70Q8NHQ1 597 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 ZFP28Q8NHY6 868 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 TP53INP1Q96A56 240 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 ZBED6CLQ96FA7 236 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 AMDHD1Q96NU7 426 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 WWTR1Q9GZV5 400 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 GLIPR2Q9H4G4 154 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 TRIM45Q9H8W5 580 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 ACSS1Q9NUB1 689 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-219ENST00000479941 LRFN1Q9P244 771 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 PRODH2Q9UF12 536 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 BCAP29Q9UHQ4 241 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 PCDHGB6Q9Y5F9 930 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 CSAG2Q9Y5P2 127 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 CPAMD8Q8IZJ3 1885 aa10.04□□□□□ -0.8
ATG4B-219ENST00000479941 A0A087WV62 115 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 PLOD2O00469 737 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 DIAPH2O60879 1101 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 SORBS2O94875 1100 aaKnown RBP10.03□□□□□ -0.8
ATG4B-219ENST00000479941 F10P00742 488 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 PTGER1P34995 402 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 SOX18P35713 384 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 CLNS1AP54105 237 aaKnown RBP10.03□□□□□ -0.8
ATG4B-219ENST00000479941 MANFP55145 182 aaKnown RBP10.03□□□□□ -0.8
ATG4B-219ENST00000479941 DCAF7P61962 342 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 MLC1Q15049 377 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 OR1C1Q15619 314 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 ZNF385BQ569K4 471 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 PIGGQ5H8A4 983 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 NXNQ6DKJ4 435 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 ANKRD26P1Q6NSI1 321 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 RPUSD3Q6P087 351 aaKnown RBP10.03□□□□□ -0.8
ATG4B-219ENST00000479941 OPN5Q6U736 354 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 ACAD11Q709F0 780 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 MAVSQ7Z434 540 aa10.03□□□□□ -0.8
ATG4B-219ENST00000479941 CAMKMTQ7Z624 323 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms