RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 PCDHGB7Q9Y5F8 929 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 TAPBPO15533 448 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 PEX11BO96011 259 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 OPRL1P41146 370 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 MLLT3P42568 568 aaPredicted RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 IRAK1BP1Q5VVH5 260 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 ANKRD33Q7Z3H0 272 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 L3MBTL4Q8NA19 623 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 CHST4Q8NCG5 386 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 GNPDA2Q8TDQ7 276 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 MSANTD3Q96H12 275 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 TMED9Q9BVK6 235 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 CPNE5Q9HCH3 593 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 TCF7L1Q9HCS4 588 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 PNO1Q9NRX1 252 aaKnown RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 SACM1LQ9NTJ5 587 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 MYO10Q9HD67 2058 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 KRBA1A5PL33 1030 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 C1QAP02745 245 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 CTGFP29279 349 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 CD97P48960 835 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 VSX2P58304 361 aaPredicted RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 SLC36A4Q6YBV0 504 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 TSACCQ96A04 125 aaPredicted RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF300Q96RE9 604 aaPredicted RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 GAL3ST1Q99999 423 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 UPB1Q9UBR1 384 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 PCDHGB1Q9Y5G3 927 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 OR52A4PA6NMU1 304 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF701M0R085 212 aaPredicted RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 PLD2O14939 933 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 OXSR1O95747 527 aaPredicted RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 CKMT1AP12532 417 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 PTNP21246 168 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 LHCGRP22888 699 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 LBX1P52954 281 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 RPS15AP62244 130 aaKnown RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 CDK3Q00526 305 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 ARHGAP19Q14CB8 494 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 UAP1L1Q3KQV9 507 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 DCDC5Q6ZRR9 648 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 VRK3Q8IV63 474 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 ATP6V1C2Q8NEY4 427 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 TSEN15Q8WW01 171 aaKnown RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 ZC3H10Q96K80 434 aaKnown RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 CNDP2Q96KP4 475 aaKnown RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 TNFRSF12AQ9NP84 129 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 ABCD2Q9UBJ2 740 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 FKBP7Q9Y680 259 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 NRXN2Q9P2S2 1712 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 FXYD6-FXYD2A0A087WZ82 144 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 LILRB3O75022 631 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 AHCYP23526 432 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 IMPA1P29218 277 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 HYAL2Q12891 473 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 HNRNPA0Q13151 305 aaKnown RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 PROX2Q3B8N5 592 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 XKR7Q5GH72 579 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 SLC35F1Q5T1Q4 408 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 LRRC25Q8N386 305 aaPredicted RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 PHOSPHO2Q8TCD6 241 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 CPPED1Q9BRF8 314 aaPredicted RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 SORBS1Q9BX66 1292 aaKnown RBP13.63□□□□□ -0.23
COL20A1-206ENST00000479501 FXYD6Q9H0Q3 95 aa13.63□□□□□ -0.23
COL20A1-206ENST00000479501 A0A075B6Q4 140 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 OR5K4A6NMS3 321 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 ANXA2P2A6NMY6 339 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 H0YIV9 168 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 ENTPD6O75354 484 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 ADAP00813 363 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 ANXA2P07355 339 aaKnown RBP13.62□□□□□ -0.23
COL20A1-206ENST00000479501 IL7P13232 177 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 DDCP20711 480 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 AGXTP21549 392 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 PNCKQ6P2M8 343 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 MYNNQ9NPC7 610 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 SLC2A4RGQ9NR83 387 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 PCDHGB5Q9Y5G0 923 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 BCAS1O75363 584 aaPredicted RBP13.62□□□□□ -0.23
COL20A1-206ENST00000479501 HOXC8P31273 242 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 C1orf61Q13536 156 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 C4orf46Q504U0 113 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 FBXO42Q6P3S6 717 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF367Q7RTV3 350 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 PRSS48Q7RTY5 328 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 TIGD4Q8IY51 512 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 PMEPA1Q969W9 287 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 NPLQ9BXD5 320 aaPredicted RBP13.62□□□□□ -0.23
COL20A1-206ENST00000479501 TRIM2Q9C040 744 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 SLC6A16Q9GZN6 736 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 BEX1Q9HBH7 125 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 MAB21L2Q9Y586 359 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 DOCK5Q9H7D0 1870 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 BRWD3Q6RI45 1802 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 SLC5A2P31639 672 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 POU6F2P78424 691 aaPredicted RBP13.62□□□□□ -0.23
COL20A1-206ENST00000479501 BORAQ6PGQ7 559 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 PTRH1Q86Y79 214 aaKnown RBP13.62□□□□□ -0.23
COL20A1-206ENST00000479501 LMNTD1Q8N9Z9 388 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF527Q8NB42 609 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms