RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 OR2J2O76002 312 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 RASAL1O95294 804 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 SDC1P18827 310 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 NT5EP21589 574 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 BGNP21810 368 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 NME2P22392 152 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 SOX18P35713 384 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 FEN1P39748 380 aaKnown RBP14.33□□□□□ -0.12
C9orf3-217ENST00000479161 C21orf58P58505 322 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 DCAF7P61962 342 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 OC90Q02509 493 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-217ENST00000479161 PDE7AQ13946 482 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 ZNF468Q5VIY5 522 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-217ENST00000479161 SPINK14Q6IE38 97 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 R3HCC1LQ7Z5L2 792 aaKnown RBP14.33□□□□□ -0.12
C9orf3-217ENST00000479161 FAM9CQ8IZT9 166 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 MMP21Q8N119 569 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 CISD2Q8N5K1 135 aaKnown RBP14.33□□□□□ -0.12
C9orf3-217ENST00000479161 BCORP1Q8N888 145 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 ZNF781Q8N8C0 355 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 ANKRD42Q8N9B4 389 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 POGLUT1Q8NBL1 392 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 SLC22A8Q8TCC7 542 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 C5orf34Q96MH7 638 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 EBPLQ9BY08 206 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 WWTR1Q9GZV5 400 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 OR10A5Q9H207 317 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 REEP4Q9H6H4 257 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 KLF13Q9Y2Y9 288 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-217ENST00000479161 FIS1Q9Y3D6 152 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 PTGDR2Q9Y5Y4 395 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 HIVEP3Q5T1R4 2406 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 A0A1W2PS29 197 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 A8MVJ9 347 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 SLC25A12O75746 678 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 CT62P0C5K7 136 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 BCKDHAP12694 445 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 NAGAP17050 411 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 TACR1P25103 407 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 FRKP42685 505 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-217ENST00000479161 RPL38P63173 70 aaKnown RBP14.32□□□□□ -0.12
C9orf3-217ENST00000479161 EMX2Q04743 252 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 ZNF628Q5EBL2 1059 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 FAM180AQ6UWF9 173 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 TICAM1Q8IUC6 712 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 TAGAPQ8N103 731 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 CYP4Z2PQ8N1L4 340 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 GOLGA6L1Q8N7Z2 621 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 FAM98AQ8NCA5 519 aaKnown RBP14.32□□□□□ -0.12
C9orf3-217ENST00000479161 THAP3Q8WTV1 239 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-217ENST00000479161 ASB15Q8WXK1 588 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 ADIPOR1Q96A54 375 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 EGLN2Q96KS0 407 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 C3orf30Q96M34 536 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 PAIP2Q9BPZ3 127 aaKnown RBP14.32□□□□□ -0.12
C9orf3-217ENST00000479161 SLX1AQ9BQ83 275 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 MANSC1Q9H8J5 431 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 TIMMDC1Q9NPL8 285 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 ACSS1Q9NUB1 689 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-217ENST00000479161 ASF1BQ9NVP2 202 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 HPF1Q9NWY4 346 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 PRODH2Q9UF12 536 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 VPS4AQ9UN37 437 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 NTNG1Q9Y2I2 539 aa14.32□□□□□ -0.12
C9orf3-217ENST00000479161 EML6Q6ZMW3 1958 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 NUP214P35658 2090 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-217ENST00000479161 C2orf92A0A1B0GVN3 265 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 CAPN14A8MX76 684 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 KLRC4-KLRK1H3BQV0 150 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 WWP2O00308 870 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 ACOX3O15254 700 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 NADKO95544 446 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-217ENST00000479161 EDN3P14138 238 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 SSTR4P31391 388 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 OCRLQ01968 901 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 DUSP2Q05923 314 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 MLC1Q15049 377 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 ZNF750Q32MQ0 723 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 ZNF791Q3KP31 576 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-217ENST00000479161 LYPD8Q6UX82 237 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 BNC2Q6ZN30 1099 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-217ENST00000479161 RTL4Q6ZR62 310 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 CCDC116Q8IYX3 515 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 ST6GALNAC3Q8NDV1 305 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 C16orf52Q8NHV5 167 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 AGR3Q8TD06 166 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 GRHL3Q8TE85 626 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 NR4A3Q92570 626 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 EXOSC8Q96B26 276 aaKnown RBP14.31□□□□□ -0.12
C9orf3-217ENST00000479161 TUBGCP3Q96CW5 907 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 TAAR6Q96RI8 345 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 BBS4Q96RK4 519 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 SECISBP2Q96T21 854 aaKnown RBP14.31□□□□□ -0.12
C9orf3-217ENST00000479161 ZNF395Q9H8N7 513 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-217ENST00000479161 MEAF6Q9HAF1 191 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 SH2D2AQ9NP31 389 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 LUZP4Q9P127 313 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 ATP6V1HQ9UI12 483 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 EXPH5Q8NEV8 1989 aa14.31□□□□□ -0.12
C9orf3-217ENST00000479161 GTF3C1Q12789 2109 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms