RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 NADKO95544 446 aaPredicted RBP16.34■□□□□ 0.21
PTPN7-209ENST00000477554 CD46P15529 392 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 TLX1P31314 330 aaPredicted RBP16.34■□□□□ 0.21
PTPN7-209ENST00000477554 FEN1P39748 380 aaKnown RBP16.34■□□□□ 0.21
PTPN7-209ENST00000477554 SSR4P51571 173 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 DUSP8Q13202 625 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 LTB4RQ15722 352 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 OR52E8Q6IFG1 317 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 LYPD8Q6UX82 237 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 TMEM64Q6YI46 380 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 SIAH3Q8IW03 269 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 SULF2Q8IWU5 870 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 DDIASQ8IXT1 998 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 ST13P4Q8IZP2 240 aaPredicted RBP16.34■□□□□ 0.21
PTPN7-209ENST00000477554 CYP4Z2PQ8N1L4 340 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 C11orf24Q96F05 449 aaPredicted RBP16.34■□□□□ 0.21
PTPN7-209ENST00000477554 C5orf34Q96MH7 638 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 ANKRA2Q9H9E1 313 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 DTX4Q9Y2E6 619 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 PCDHA9Q9Y5H5 950 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 ICE1Q9Y2F5 2266 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 FCHO1O14526 889 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 OR10H2O60403 315 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 SKAP2O75563 359 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-209ENST00000477554 HSD3B1P14060 373 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 HSD3B2P26439 372 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 AQP5P55064 265 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 PLIN5Q00G26 463 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 CSTF3Q12996 717 aaKnown RBP16.33■□□□□ 0.2
PTPN7-209ENST00000477554 INAQ16352 499 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 C1QL3Q5VWW1 255 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 CGB2Q6NT52 195 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 FAM111BQ6SJ93 734 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 SPATA21Q7Z572 469 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 CHERPQ8IWX8 916 aaKnown RBP16.33■□□□□ 0.2
PTPN7-209ENST00000477554 TMEM156Q8N614 296 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 GBP7Q8N8V2 638 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-209ENST00000477554 ADCY4Q8NFM4 1077 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 STON2Q8WXE9 905 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 RIT1Q92963 219 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 RBM18Q96H35 190 aaKnown RBP16.33■□□□□ 0.2
PTPN7-209ENST00000477554 FBXL20Q96IG2 436 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 ELAC2Q9BQ52 826 aaKnown RBP16.33■□□□□ 0.2
PTPN7-209ENST00000477554 NUF2Q9BZD4 464 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 MEAF6Q9HAF1 191 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 DCTN4Q9UJW0 460 aa16.33■□□□□ 0.2
PTPN7-209ENST00000477554 YARS2Q9Y2Z4 477 aaKnown RBP16.33■□□□□ 0.2
PTPN7-209ENST00000477554 SPTAN1Q13813 2472 aaKnown RBP16.32■□□□□ 0.2
PTPN7-209ENST00000477554 NCKAP5O14513 1909 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 A1L4Q6 167 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 NPIPA5E9PKD4 350 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 SLC28A1O00337 649 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 ZNF195O14628 629 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 PIP5K1BO14986 540 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 LRATO95237 230 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 IL3P08700 152 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 SLC35E2P0CK97 266 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 S1PR1P21453 382 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 ALDH9A1P49189 494 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 MEOX1P50221 254 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 XKP51811 444 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 SLC37A1P57057 533 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 MGAT2Q10469 447 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 SLC48A1Q6P1K1 146 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 EPGNQ6UW88 154 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 GFRALQ6UXV0 394 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 TRIM46Q7Z4K8 759 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 FGD2Q7Z6J4 655 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 CNRIP1Q96F85 164 aaPredicted RBP16.32■□□□□ 0.2
PTPN7-209ENST00000477554 THOC1Q96FV9 657 aaKnown RBP16.32■□□□□ 0.2
PTPN7-209ENST00000477554 TUBB1Q9H4B7 451 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 CXorf21Q9HAI6 301 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 NMRK1Q9NWW6 199 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 AHSPQ9NZD4 102 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 NPIPA1Q9UND3 350 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 CCL27Q9Y4X3 112 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 PCDHGB6Q9Y5F9 930 aa16.32■□□□□ 0.2
PTPN7-209ENST00000477554 A0A0G2JND7 137 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 LRRTM2O43300 516 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 RGS14O43566 566 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 PCDH7O60245 1069 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 SNX3O60493 162 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 ERAL1O75616 437 aaKnown RBP16.31■□□□□ 0.2
PTPN7-209ENST00000477554 LDLRP01130 860 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 LINC00032P0C843 101 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 CCL3P10147 92 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 CPMP14384 443 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 PIK3R1P27986 724 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 ARFIP2P53365 341 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 EXOSC7Q15024 291 aaKnown RBP16.31■□□□□ 0.2
PTPN7-209ENST00000477554 IMPG1Q17R60 797 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 SPRED3Q2MJR0 410 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 NCCRP1Q6ZVX7 275 aaPredicted RBP16.31■□□□□ 0.2
PTPN7-209ENST00000477554 ACAD11Q709F0 780 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 PAGE2Q7Z2X7 111 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 OR4K14Q8NGD5 310 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 OR2T11Q8NH01 316 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 RFWD2Q8NHY2 731 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 BCAS4Q8TDM0 211 aa16.31■□□□□ 0.2
PTPN7-209ENST00000477554 C16orf78Q8WTQ4 265 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms